v0.9

Imputation/PRS

• Handle no-calls at APOl1 risk alleles in ckd adjustment (#62)
• Added HTML report feature (#69)
• PRS Reportable Range Check (#88)
• Aggregate PRS Output (#92)
• Add Interaction terms to PRS pipeline (#90)
• Notebook for manual QC editing of prs results table (#93)
• PRS: Interactive PCA plot (#94)
• Changed batch_id to lab_batch and is_control to is_control_sample (#95)
• Add --allow-extra-chr to GenotypeG1G2RiskAlleles by (#96)
• Separate training on population from application of ancestry adjustment in prs pipeline (#91)
• Pass through lab_batch in PRSWrapper, and dynamically find tables (#98)
• PRS missing sites QC (#99)
• Remove personal dockers in PRS pipeline (#100)
• Pass through is_control_sample (#101)
• Aggregate PRS: Added logic to compare control sample vs expected control results by (#102)
• Formatting improvements to aggregation report (#105)

FindSamplesAndBenchmark

• Fixing some issues and updating FindSamplesAndBenchmark (#86)

BenchmarkVCFs

• BenchmarkVCFs: Fixed a bug where NA is written to output files (#89)

General

• Fix copyright in license (#104)