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broadinstitute/jump-profiling-recipe

JUMP Profiling Recipe

The JUMP Profiling Recipe provides a Snakemake workflow designed for preprocessing and analyzing JUMP dataset profiles.

See the DOCUMENTATION.md file for comprehensive documentation on the workflow, including:

  • Detailed workflow structure and processing stages
  • Configuration options and parameters
  • Available rules and their purposes
  • How to customize the pipeline for different analyses
  • Troubleshooting tips

License

This project is licensed under the terms specified in the LICENSE file.

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Workflow for processing cpg0016-jump profiles

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