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WDL to create the participant mapping table [VS-1632] #5884

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WDL to create the participant mapping table [VS-1632]

WDL to create the participant mapping table [VS-1632] #5884

Triggered via pull request October 14, 2025 19:11
@mcovarrmcovarr
synchronize #9283
vs_1632_foxtrot_participant_mapping_table
Status Success
Total duration 52m 27s
Artifacts 8

gatk-tests.yml

on: pull_request
check if the environment has privileges
3s
check if the environment has privileges
build and push gatk docker to artifacts
14m 49s
build and push gatk docker to artifacts
Validate script WDLs using womtools
4m 1s
Validate script WDLs using womtools
Validate generated WDLs using womtools
16m 12s
Validate generated WDLs using womtools
Matrix: wdlTests
Matrix: test
Matrix: testOnDocker
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8 errors
WDL test RUN_CNV_SOMATIC_WDL on cromwell
Process completed with exit code 1.
unit build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
cloud build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
integration build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
unit test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
variantcalling test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
conda test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
integration test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth

Artifacts

Produced during runtime
Name Size Digest
gatkDockerImage
2.29 GB
sha256:d1b0f0003f2ec6811e8564f6d8a960d46dd7a20b14fb6494196318d49419e390
test-results-17.0.6+10-cloud
87 KB
sha256:4e91a2180928e291e821113b55e050e3ee38e8d31d43875adc55b39d279a7b32
test-results-17.0.6+10-integration
578 KB
sha256:dd9813b5f05312afcb3d1c37085ae37b6d549f00b811abd1410fc558068ec243
test-results-17.0.6+10-unit
5.15 MB
sha256:d639b6ec1e2eefb4e76d22db5c071367b96e3c52cce69a53a23917621741e561
test-results-docker-17.0.6+10-conda
59.6 KB
sha256:cdf2a7660edf180873855d0400abbee3085ada6b24d3410429dbb7354d92898b
test-results-docker-17.0.6+10-integration
580 KB
sha256:13debcb9fe86d276de8d2ea74fc25e522885a457f8a4a61ed16b303443dba04c
test-results-docker-17.0.6+10-unit
5.01 MB
sha256:85e0764539001cab156aecefe65bf8a7e443baeb71388abe8bd0ba336d2051f7
test-results-docker-17.0.6+10-variantcalling
31.8 KB
sha256:1775fa93e6bd24d8913e3531bc70dcf0f147fdcb097dfcd30c5f626421ae0b2b