bhklab · jjjermiah · Dec 11, 2024 · Dec 11, 2024 · Dec 11, 2024 · Dec 11, 2024
diff --git a/config/ruff.toml b/config/ruff.toml
@@ -3,7 +3,8 @@ cache-dir = "~/.cache/ruff"
 # iteratively adding files to the include list
 include = [
   "src/readii/loaders.py",
-  "src/readii/feature_extraction.py"
+  "src/readii/feature_extraction.py",
+  "src/readii/negative_controls_refactor/**.py",
 ]
 
 # extend-exclude is used to exclude directories from the flake8 checks

diff --git a/notebooks/viz_neg_4D.ipynb b/notebooks/viz_neg_4D.ipynb
diff --git a/notebooks/viz_neg_controls.ipynb b/notebooks/viz_neg_controls.ipynb
diff --git a/old_pyproject.toml b/old_pyproject.toml