Popular repositories Loading

1. currentscapes-invivo-demo currentscapes-invivo-demo Public template

   This repository demonstrates an application of the currentscape method to in vivo-like biophysical simulations of hippocampal CA1 neurons. The analysis visualizes how membrane currents distributed …

   Python 1

2. polar-parser polar-parser Public

   This repository contains code for parsing json files downloaded from the Polar account. The json files contain data recorded by the Polar sportwatch.

   Python 1

3. currentscapes-invitro-demo currentscapes-invitro-demo Public

   This repository demonstrates an extension of the currentscape method for analyzing the contributions of individual membrane currents to somatic responses in spatially extended biophysical neuron mo…

   Python

4. ca1-model-tuning ca1-model-tuning Public

   This repository performs automated parameter optimization to maximize calcium Ca2+ influx in the trunk of a CA1 pyramidal neuron model while minimizing calcium influx in oblique dendrites, using th…

   Python

5. ca1-dendritic-integration ca1-dendritic-integration Public

   This project simulates synaptic input integration of oblique dendrites in a CA1 pyramidal neuron model.

   Jupyter Notebook

6. ca1-bittner ca1-bittner Public

   This project replicates the intracellular current injection experiments from Bittner et al., 2015, Fig. 6a, demonstrating plateau potential initiation in CA1 pyramidal neurons through direct somati…

   Jupyter Notebook