Automated Tests for Galaxy on Kubernetes Stacks

Galaxy on GKE deployed via GalaxyKubeMan (AnVIL)

Deployment Testing

Twice a day, GalaxyKubeMan (GKM) is deployed on GKE, mimicking an AnVIL deployment. The purpose of these tests is to provide reasonable confidence that Galaxy is launchable on the AnVIL everyday.

Below is a plot summarizing successful deployments and GKM install times. Click here or on the image for more details.

Tool Testing

After each successful deployment, automated tool tests are also run against the instance. These serve as an end-to-end-like test for Galaxy, providing confidence that Galaxy is not only launchable but functional. These tests cycle on a weekly basis through the entire suite of tools installed by default on AnVIL, providing reasonable confidence that the tools encountered by most users remain functional, and automating the detection and reporting of tools breaking.

Latest tool tests for each chunk:

Chunk ID	Tool List	Latest report	Previous report
0	Toolset	Mon Aug 04 01:09:35 2025	Mon Jul 28 01:08:02 2025
1	Toolset	Mon Aug 04 13:06:42 2025	Mon Jul 21 13:05:36 2025
2	Toolset	Tue Aug 05 01:04:12 2025	Tue Jul 29 01:08:19 2025
3	Toolset	Tue Aug 05 13:07:23 2025	Tue Jul 29 13:06:14 2025
4	Toolset	Wed Aug 06 01:03:05 2025	Wed Jul 30 01:03:03 2025
5	Toolset	Wed Aug 06 13:10:09 2025	Wed Jul 30 13:06:34 2025
6	Toolset	Thu Aug 07 01:04:22 2025	Thu Jul 31 01:04:25 2025
7	Toolset	Thu Aug 07 13:07:19 2025	Thu Jul 31 13:06:44 2025
8	Toolset	Fri Aug 08 01:03:49 2025	Fri Aug 01 01:10:06 2025
9	Toolset	Fri Aug 01 13:05:11 2025	Fri Jul 25 13:02:50 2025
10	Toolset	Sat Aug 02 01:02:02 2025	Sat Jul 26 01:01:24 2025
11	Toolset	Sat Aug 02 12:59:10 2025	Sat Jul 26 12:59:05 2025
12	Toolset	Sun Aug 03 01:09:34 2025	Sun Jul 27 01:08:33 2025
13	Toolset	Sun Aug 03 13:03:13 2025	Sun Jul 27 13:00:17 2025