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Make GFF parsing more robust to variations in gene nomenclature BactSeq CI #133: Commit e7197fb pushed by adamd3
July 20, 2025 09:57 3m 59s main
main
July 20, 2025 09:57 3m 59s
Make GFF parsing more robust to variations in gene nomenclature BactSeq CI #132: Commit e140d56 pushed by adamd3
July 20, 2025 09:53 3m 44s develop
develop
July 20, 2025 09:53 3m 44s
Merge branch 'main' into develop BactSeq CI #131: Commit 576a6e1 pushed by adamd3
July 19, 2025 19:09 6m 33s develop
develop
July 19, 2025 19:09 6m 33s
Add update re: activation of conda env in Docker image BactSeq CI #130: Commit 070517b pushed by adamd3
July 19, 2025 19:09 5m 4s main
main
July 19, 2025 19:09 5m 4s
Merge branch 'main' of github.com:adamd3/BactSeq BactSeq CI #129: Commit bed9d8b pushed by adamd3
July 19, 2025 19:08 4m 38s main
main
July 19, 2025 19:08 4m 38s
Fix Docker container environment for Nextflow 25.04.0 compatibility (… BactSeq CI #128: Commit 4864ba9 pushed by adamd3
July 19, 2025 18:57 4m 35s main
main
July 19, 2025 18:57 4m 35s
Fix Docker container environment for Nextflow 25.04.0 compatibility BactSeq CI #127: Pull request #13 opened by adamd3
July 19, 2025 18:57 2m 20s develop
develop
July 19, 2025 18:57 2m 20s
Use only the environment variables to activate conda env BactSeq CI #126: Commit 3ad6826 pushed by adamd3
July 19, 2025 18:49 4m 59s develop
develop
July 19, 2025 18:49 4m 59s
Add conda environment activation with CONDA_DEFAULT_ENV BactSeq CI #125: Commit cf7c9f2 pushed by adamd3
July 19, 2025 18:46 1m 25s develop
develop
July 19, 2025 18:46 1m 25s
Merge branch 'main' into develop BactSeq CI #124: Commit d82241c pushed by adamd3
July 19, 2025 13:59 4m 49s develop
develop
July 19, 2025 13:59 4m 49s
Update CI to use Nextflow 25.04.0 and clean up debugging BactSeq CI #123: Commit 0471cbb pushed by adamd3
July 19, 2025 13:44 3m 16s develop
develop
July 19, 2025 13:44 3m 16s
Merge branch 'develop' BactSeq CI #122: Commit c36147a pushed by adamd3
July 19, 2025 12:33 8m 0s main
main
July 19, 2025 12:33 8m 0s
Remove debugging from meta module BactSeq CI #121: Commit 3b79e34 pushed by adamd3
July 19, 2025 12:32 9m 7s main
main
July 19, 2025 12:32 9m 7s
Revert to pandas:1.1.5 container for debugging BactSeq CI #120: Commit 458c5d3 pushed by adamd3
July 19, 2025 12:29 12m 26s main
main
July 19, 2025 12:29 12m 26s
Revert to pandas:1.1.5 container for debugging BactSeq CI #119: Commit e37a8e7 pushed by adamd3
July 19, 2025 12:14 4m 41s develop
develop
July 19, 2025 12:14 4m 41s
Add debugging output to MAKE_META_FILE process BactSeq CI #118: Commit 400dfe2 pushed by adamd3
July 19, 2025 11:50 4m 1s develop
develop
July 19, 2025 11:50 4m 1s
remove projectDir path when creating metadata BactSeq CI #117: Commit 9f6ecab pushed by adamd3
July 19, 2025 11:44 2m 59s develop
develop
July 19, 2025 11:44 2m 59s
Fix missing --ref_genome parameter in BWA CI test BactSeq CI #116: Commit 9959d8a pushed by adamd3
July 19, 2025 11:33 4m 28s develop
develop
July 19, 2025 11:33 4m 28s
Fix script path for Nextflow 23.10.1+ compatibility BactSeq CI #115: Commit 59a61cd pushed by adamd3
July 19, 2025 11:10 4m 20s develop
develop
July 19, 2025 11:10 4m 20s
Use miniconda3 container BactSeq CI #114: Commit 10ff9c8 pushed by adamd3
July 19, 2025 10:58 4m 11s develop
develop
July 19, 2025 10:58 4m 11s
Fix BWA index and functional enrichment for Nextflow 23.10.1+ compati… BactSeq CI #113: Commit 19a3b1f pushed by adamd3
July 19, 2025 10:55 2m 59s develop
develop
July 19, 2025 10:55 2m 59s
Revert to simple approach for Nextflow compatibility BactSeq CI #112: Commit 12dd875 pushed by adamd3
July 19, 2025 10:48 4m 3s develop
develop
July 19, 2025 10:48 4m 3s
Fix MAKE_META_FILE container configuration BactSeq CI #111: Commit 596966b pushed by adamd3
July 19, 2025 10:39 2m 58s develop
develop
July 19, 2025 10:39 2m 58s
Fix BWA index and functional enrichment for Nextflow 23.10.1+ compati… BactSeq CI #110: Commit 19a3b1f pushed by adamd3
July 19, 2025 10:30 3m 10s develop
develop
July 19, 2025 10:30 3m 10s
Avoid wildcard matching for compatibility with recent nextflow versions BactSeq CI #109: Commit 37f300d pushed by adamd3
July 19, 2025 10:21 4m 44s develop
develop
July 19, 2025 10:21 4m 44s