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SPAdes usecases

fix spades core path when dumping commands to yaml #184

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fix spades core path when dumping commands to yaml

fix spades core path when dumping commands to yaml #184

Triggered via push September 1, 2025 19:17
@andrewprzhandrewprzh
pushed 3631ce0
main
Status Success
Total duration 39m 8s
Artifacts 1

usecases.yml

on: push
🚧 Build SPAdes
1m 40s
🚧 Build SPAdes
Multicell B.cereus TruSeq 100x
4m 18s
Multicell B.cereus TruSeq 100x
Nextera L.monocytogenes
1m 13s
Nextera L.monocytogenes
Contigs E.coli JGI lane 7
3m 55s
Contigs E.coli JGI lane 7
Full run M.ruber JGI lane 9
5m 27s
Full run M.ruber JGI lane 9
IonTorrent E.coli K12
30m 34s
IonTorrent E.coli K12
Mate-pairs B.faecium
2m 26s
Mate-pairs B.faecium
Single-cell P.heparinus JGI lane 7
2m 36s
Single-cell P.heparinus JGI lane 7
plasmidSPAdes C.callunae
6m 59s
plasmidSPAdes C.callunae
Single reads E.coli Deeptrench
1m 51s
Single reads E.coli Deeptrench
PacBio M.ruber
3m 58s
PacBio M.ruber
Saves E.coli 100K
51s
Saves E.coli 100K
Saves E.coli UCSD lane 1
8m 42s
Saves E.coli UCSD lane 1
metaSPAdes JGI 150
16m 37s
metaSPAdes JGI 150
metaviralSPAdes ERR525599
14m 28s
metaviralSPAdes ERR525599
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Artifacts

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Name Size Digest
build-artifacts Expired
54.8 MB
sha256:524543e4981ea72715ecb5a8b911dd25263663f89a8cdf1b9f9c8049388cb34b