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SPAdes usecases

SPAdes usecases #168

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SPAdes usecases

SPAdes usecases #168

Manually triggered July 7, 2025 22:40
@andrewprzhandrewprzh
⁠ 74b6820
python-ref
Status Success
Total duration 47m 37s
Artifacts 1

usecases.yml

on: workflow_dispatch
🚧 Build SPAdes
4m 15s
🚧 Build SPAdes
Multicell B.cereus TruSeq 100x
4m 16s
Multicell B.cereus TruSeq 100x
Nextera L.monocytogenes
1m 12s
Nextera L.monocytogenes
Contigs E.coli JGI lane 7
3m 59s
Contigs E.coli JGI lane 7
Full run M.ruber JGI lane 9
5m 15s
Full run M.ruber JGI lane 9
IonTorrent E.coli K12
29m 31s
IonTorrent E.coli K12
Mate-pairs B.faecium
2m 23s
Mate-pairs B.faecium
Single-cell P.heparinus JGI lane 7
2m 40s
Single-cell P.heparinus JGI lane 7
plasmidSPAdes C.callunae
7m 54s
plasmidSPAdes C.callunae
Single reads E.coli Deeptrench
1m 44s
Single reads E.coli Deeptrench
PacBio M.ruber
4m 33s
PacBio M.ruber
Saves E.coli 100K
51s
Saves E.coli 100K
Saves E.coli UCSD lane 1
8m 52s
Saves E.coli UCSD lane 1
metaSPAdes JGI 150
14m 50s
metaSPAdes JGI 150
metaviralSPAdes ERR525599
15m 15s
metaviralSPAdes ERR525599
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Artifacts

Produced during runtime
Name Size Digest
build-artifacts Expired
54.8 MB
sha256:b0e92b4e05cf13fefa12f3d8b67a0f89cbef965304e6494f4cf2ad18b3403857