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SPAdes usecases

Fix GFA v1.2 handling in BinSPreader and around #141

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Fix GFA v1.2 handling in BinSPreader and around

Fix GFA v1.2 handling in BinSPreader and around #141

Triggered via push March 11, 2025 07:40
@aslasl
pushed 80f282e
main
Status Success
Total duration 37m 33s
Artifacts 1

usecases.yml

on: push
🚧 Build SPAdes
2m 31s
🚧 Build SPAdes
Multicell B.cereus TruSeq 100x
4m 14s
Multicell B.cereus TruSeq 100x
Nextera L.monocytogenes
57s
Nextera L.monocytogenes
Contigs E.coli JGI lane 7
4m 3s
Contigs E.coli JGI lane 7
Full run M.ruber JGI lane 9
11m 17s
Full run M.ruber JGI lane 9
IonTorrent E.coli K12
28m 26s
IonTorrent E.coli K12
Mate-pairs B.faecium
2m 17s
Mate-pairs B.faecium
Single-cell P.heparinus JGI lane 7
2m 58s
Single-cell P.heparinus JGI lane 7
plasmidSPAdes C.callunae
7m 4s
plasmidSPAdes C.callunae
Single reads E.coli Deeptrench
7m 12s
Single reads E.coli Deeptrench
PacBio M.ruber
4m 32s
PacBio M.ruber
Saves E.coli 100K
46s
Saves E.coli 100K
Saves E.coli UCSD lane 1
9m 12s
Saves E.coli UCSD lane 1
metaSPAdes JGI 150
15m 41s
metaSPAdes JGI 150
metaviralSPAdes ERR525599
15m 0s
metaviralSPAdes ERR525599
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Artifacts

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Name Size Digest
build-artifacts Expired
54.5 MB
sha256:e417d0a988df3812527b361af574b20f7aee6e0b6343b572ce0ba7aea538252f