v7.1.0

MCMCChains v7.1.0

Diff since v7.0.1

Changelog

• Implemented Violin Plot in #316 (v7.0.1) but it's a new functionality so releasing v7.1.0 to follow semantic versioning.

Merged pull requests:

• Re-release 7.0.1 as 7.1.0 to follow semantic versioning (#479) (@shravanngoswamii)

v7.0.1

MCMCChains v7.0.1

Diff since v7.0.0

Changelog

• Implemented Violin Plot

Merged pull requests:

• New Plot: Violin Plot Implementation (#316) (@PaulinaMartin96)
• CompatHelper: bump compat for CairoMakie to 0.13 for package docs, (keep existing compat) (#472) (@github-actions[bot])

v7.0.0

MCMCChains v7.0.0

Diff since v6.0.7

Breaking changes

• display() only prints the chains header and not statistical evaluations anymore.
• describe() is now a pure IO function and does not return anything.

Merged pull requests:

• Make Chains objects display only information and not statistical eval (#307) (@PaulinaMartin96)
• CompatHelper: bump compat for CairoMakie to 0.13 for package docs, (keep existing compat) (#468) (@github-actions[bot])
• Documentation and Turing Navigation CI improvement (#471) (@shravanngoswamii)
• Add JuliaFormatter workflow, update macOS CI to aarch64 (#474) (@penelopeysm)
• 1.6.0 CI fails, need to bump minimum version (#476) (@penelopeysm)
• DocsGHA: Grant write permission to pull-requests event (#477) (@shravanngoswamii)

Closed issues:

• names() and get() for a specific section should always return parameters in the same order (#443)
• update branch protection rules (#475)

v6.0.7

MCMCChains v6.0.7

Diff since v6.0.6

Merged pull requests:

• Add documentation and docstrings for ridgeline, forest and caterpilar plots (#328) (@PaulinaMartin96)
• CompatHelper: bump compat for CairoMakie to 0.12 for package docs, (keep existing compat) (#455) (@github-actions[bot])
• Diagnostics : added navbar workflow (#458) (@jeetsuthar)
• Update DocsNav.yml (#459) (@shravanngoswamii)
• Move docstrings to respective functions (#461) (@devmotion)
• Update GH actions config (#462) (@devmotion)
• Do not allow older versions of test packages anymore (#463) (@devmotion)
• Bump codecov/codecov-action from 1 to 5 (#464) (@dependabot[bot])
• keep parameter order (#466) (@a1ix2)
• Bump patch version to v6.0.7 (#467) (@mhauru)

Closed issues:

• MCMCChains.get_sections broken in 6.0.4 (#446)
• Simple chains throw errors when displayed (#447)
• Formatting.jl is being deprecated (#453)
• A chain to vector of NamedTuples utility? (#456)
• corner plot issue (#457)

v6.0.6

MCMCChains v6.0.6

Diff since v6.0.5

Merged pull requests:

• CompatHelper: add new compat entry for Statistics at version 1 for package test, (keep existing compat) (#449) (@github-actions[bot])
• Remove deprecated Formatting (#451) (@devmotion)
• Fix tests for MCMCDiagnosticTools 0.3.10 (#452) (@devmotion)

Closed issues:

• Formatting.jl is deprecated (#450)

v6.0.5

MCMCChains v6.0.5

Diff since v6.0.4

Merged pull requests:

• Fix autocorplot on Julia 1.10 and update compat entries (#448) (@devmotion)

Closed issues:

• autocorplot not working with Julia 1.10.0 rc2 (#445)

v6.0.4

MCMCChains v6.0.4

Diff since v6.0.3

Merged pull requests:

• CompatHelper: bump compat for Documenter to 1 for package docs, (keep existing compat) (#432) (@github-actions[bot])
• CompatHelper: bump compat for Documenter to 1 for package test, (keep existing compat) (#433) (@github-actions[bot])
• CompatHelper: bump compat for MLJBase to 1 for package docs, (keep existing compat) (#434) (@github-actions[bot])
• CompatHelper: bump compat for MLJBase to 1 for package test, (keep existing compat) (#435) (@github-actions[bot])
• Update chains.jl (#437) (@sunxd3)
• CompatHelper: bump compat for AbstractMCMC to 5, (keep existing compat) (#438) (@github-actions[bot])
• CompatHelper: bump compat for AbstractMCMC to 5 for package test, (keep existing compat) (#439) (@github-actions[bot])

Closed issues:

• write(file, chn) fails due to missing method (#425)
• Array(chn) drops third dimension for nchain==1 (#429)

v6.0.3

MCMCChains v6.0.3

Diff since v6.0.2

Merged pull requests:

• Forward missing arguments to summarystats (#424) (@devmotion)

v6.0.2

MCMCChains v6.0.2

Diff since v6.0.1

Closed issues:

• corner fails with certain backends (#414)

Merged pull requests:

• CompatHelper: bump compat for MLJDecisionTreeInterface to 0.4 for package docs, (keep existing compat) (#407) (@github-actions[bot])
• CompatHelper: bump compat for MLJDecisionTreeInterface to 0.4 for package test, (keep existing compat) (#408) (@github-actions[bot])
• CompatHelper: bump compat for StatsBase to 0.34, (keep existing compat) (#416) (@github-actions[bot])
• CompatHelper: bump compat for StatsBase to 0.34 for package test, (keep existing compat) (#417) (@github-actions[bot])
• Fix test compats (#422) (@devmotion)
• Version bump (#423) (@yebai)

v6.0.1

MCMCChains v6.0.1

Diff since v6.0.0

Closed issues:

• Sampling from chain gives an error (#324)
• Integration with InferenceObjects.jl (#381)
• corner breaks because of chains usage (#413)

Merged pull requests:

• Allow show to function properly even if some statistic computations fail (#412) (@torfjelde)
• Fixes for corner (#415) (@torfjelde)