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Is it possible to mid start the workflow and reuse the old he.tiff and npz files?

Status: Open.

#64 In Teichlab/bin2cell;

· chiwwong opened on Jul 12, 2025

Extracting spatial information of marked cells

Status: Open.

#63 In Teichlab/bin2cell;

· larsenprokop opened on Jul 9, 2025

Does Bin2cell currently accept input that is a portion of the whole slide

Status: Open.

#62 In Teichlab/bin2cell;

· chiwwong opened on Jul 1, 2025

prob_thresh for stardist function

Status: Open.

#61 In Teichlab/bin2cell;

· mei-du opened on Jun 24, 2025

Workaround for Annotation Without Napari: Using QuPath with bin2cell

Status: Open.

#59 In Teichlab/bin2cell;

· Sergio-ote opened on Jun 4, 2025

spline-dist models integration?

Status: Open.

#57 In Teichlab/bin2cell;

· jairaj-mathur opened on Apr 20, 2025

System Crash when import bin2cell as b2c

Status: Open.

#56 In Teichlab/bin2cell;

· HDEzhsw opened on Apr 19, 2025

bin_to_cell functioning

Status: Open.

#51 In Teichlab/bin2cell;

· Sergio-ote opened on Mar 6, 2025

<code>b2c.destripe()</code> worsens row/column-related technical effect

Status: Open.

#45 In Teichlab/bin2cell;

· Nick-Eagles opened on Feb 6, 2025

bin2cell segmentation (with VisiumHD 2um bins information) AnnData conversion to SpatialData, please?

Status: Open.

#31 In Teichlab/bin2cell;

· Pancreas-Pratik opened on Nov 29, 2024

how to load local model for b2c.stardist function

Status: Open.

#28 In Teichlab/bin2cell;

· dfgao opened on Nov 25, 2024

How to use <code>b2c.view_labels()</code> for cell-type or specific gene visualization?

Status: Open.

#24 In Teichlab/bin2cell;

· Pancreas-Pratik opened on Nov 17, 2024