chore: update integration test in CI #162
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| name: Integration tests | |
| on: [push] | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ '3.8', '3.9', '3.10' ] | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| sudo apt install bedtools | |
| python -m pip install --upgrade pip | |
| pip install -r requirements.txt | |
| pip install . | |
| - name: Run integration tests | |
| run: | | |
| make clean integration_tests |