chore: test ci #183
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| name: Unit tests | |
| on: [push] | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ '3.8', '3.9', '3.10' ] | |
| container: | |
| image: python:${{ matrix.python-version }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install setuptools wheel coverage | |
| pip install virtualenv tox==3.26.0 tox-wheel==1.0.0 tox-gh-actions | |
| - name: Build, install and run unit tests | |
| run: | | |
| pip install -r requirements.txt | |
| pip install --force-reinstall "numpy==1.24.4" | |
| pip install --no-cache-dir --force-reinstall --no-binary :all: cyvcf2 | |
| coverage run -m unittest discover vafator.tests | |
| - name: Upload Coverage to Codecov | |
| uses: codecov/codecov-action@v3 |