Search results

Implement decoy-aware transcriptome indexing with salmon

Status: Open.

#38 In TBradley27/FilTar;

· TBradley27 opened on Feb 23, 2025

[ENHANCEMENT] Make the possibility to use transcriptomes from VectorBase

Status: Open.

#37 In TBradley27/FilTar;

· livisupajares opened on Feb 14, 2025

FilTar error message

Status: Open.

#36 In TBradley27/FilTar;

· ntinamu001 opened on May 6, 2021

Eliminate use of shell scripts

Status: Open.

#34 In TBradley27/FilTar;

· TBradley27 opened on Mar 19, 2021

Standardise and minimise name space throughout the repository

Status: Open.

#33 In TBradley27/FilTar;

· TBradley27 opened on Mar 19, 2021

Add gene symbol metadata when executing APAtrap

Status: Open.

#32 In TBradley27/FilTar;

· TBradley27 opened on Mar 19, 2021

Speed up the process of generating average bedgraph coverage values from many bedgraph files

Status: Open.

#31 In TBradley27/FilTar;

· TBradley27 opened on Mar 19, 2021

Add rule to validate generated bedgraph files

Status: Open.

#30 In TBradley27/FilTar;

· TBradley27 opened on Mar 19, 2021

Generate a report regarding the extent of 3'UTR reannotation

Status: Open.

#29 In TBradley27/FilTar;

· TBradley27 opened on Mar 18, 2021

Implement a more sophisticated method of mapping chromosome/scaffold identifiers

Status: Open.

#28 In TBradley27/FilTar;

· TBradley27 opened on Mar 18, 2021

Add a line at the top of each script stating its function

Status: Open.

#27 In TBradley27/FilTar;

· TBradley27 opened on Mar 18, 2021

Switch to using toplevel genomes only

Status: Open.

#26 In TBradley27/FilTar;

· TBradley27 opened on Mar 18, 2021