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PySCeS release 1.2.3

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@jmrohwer jmrohwer released this 07 May 09:03
· 1 commit to main since this release
1.2.3
a48bfc6

We are pleased to announce the release of the Python Simulator for Cellular Systems:
PySCeS (https://pysces.github.io/) version 1.2.3.

This is mainly a bugfix release.

Notable changes

  • Fix Python 3.13 compatibility issues and release 3.13 binaries
  • Fix use of deprecated features in Python, scipy and numpy:
    • == None -> is None
    • unittest.makeSuite()
    • scipy.misc.derivative (requires new dependency numdifftools for numdifftools.Derivative replacement)
  • Add several additional unit tests test the optional dependences (libsbml as well as CVODE from assimulo)
  • Fix several other bugs

README: https://github.com/PySCeS/pysces/blob/main/README.md

DOCUMENTATION: https://pyscesdocs.readthedocs.io/en/latest/

© Brett Olivier and Johann Rohwer, May 2025.

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