Data structures, math and statistics tools, and utilities that are often needed across projects.
Used by Gemma, ErmineJ, GEOMMTx and others.
The R integration relies on native packages that needs to be installed in your local Maven repository in order to build baseCode.
rJava is usually available as a system package or it can be installed from source or using
install.packages("rJava") in R.
Rserve has to be installed from source with install.packages("Rserve").
# You may need to adjust the path depending on your system.
mvn install:install-file -DgroupId=org.rosuda.REngine -DartifactId=REngine -Dversion=1.0-13 -Dpackaging=jar -Dfile=/usr/lib64/R/library/rJava/jri/REngine.jar
mvn install:install-file -DgroupId=org.rosuda.REngine -DartifactId=JRI -Dversion=1.0-13 -Dpackaging=jar -Dfile=/usr/lib64/R/library/rJava/jri/JRI.jar
mvn install:install-file -DgroupId=org.rosuda.REngine -DartifactId=JRIEngine -Dversion=1.0-13 -Dpackaging=jar -Dfile=/usr/lib64/R/library/rJava/jri/JRIEngine.jar
mvn install:install-file -DgroupId=org.rosuda.REngine -DartifactId=Rserve -Dversion=1.8-14 -Dpackaging=jar -Dfile=/usr/lib64/R/library/Rserve/java/Rserve.jar