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Doc: fixing required installation cell #98

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Merged
merged 3 commits into from
Apr 4, 2025
Merged

Doc: fixing required installation cell #98

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6dbae90
fix: adding "!" before pip3 in installation cell, adding zenode_get t…
Mag-D-Anas Apr 3, 2025
5cd8a7d
fix: clearing output messages
Mag-D-Anas Apr 3, 2025
addeb28
doc: fixing another cell
Mag-D-Anas Apr 3, 2025
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30 changes: 11 additions & 19 deletions doc/Introduction_to_TF24_IVIM-MRI_CodeCollection_github_and_IVIM_Analysis_using_Python.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -45,25 +45,17 @@
},
{
"cell_type": "code",
"execution_count": 3,
"execution_count": null,
"id": "56273b2a",
"metadata": {},
"outputs": [
{
"ename": "SyntaxError",
"evalue": "invalid syntax (882689640.py, line 2)",
"output_type": "error",
"traceback": [
"\u001b[1;36m Cell \u001b[1;32mIn[3], line 2\u001b[1;36m\u001b[0m\n\u001b[1;33m pip3 install numpy\u001b[0m\n\u001b[1;37m ^\u001b[0m\n\u001b[1;31mSyntaxError\u001b[0m\u001b[1;31m:\u001b[0m invalid syntax\n"
]
}
],
"outputs": [],
"source": [
"# install packages through anaconda prompt\n",
"pip3 install numpy\n",
"pip3 install matplotlib\n",
"pip3 install scipy\n",
"pip3 install nibabel"
"!pip3 install numpy\n",
"!pip3 install matplotlib\n",
"!pip3 install scipy\n",
"!pip3 install nibabel\n",
"!pip3 install zenodo_get"
]
},
{
Expand All @@ -76,7 +68,7 @@
},
{
"cell_type": "code",
"execution_count": 4,
"execution_count": null,
"id": "9654f12d-6cfc-4639-884e-d7f2b23fa59f",
"metadata": {},
"outputs": [],
Expand Down Expand Up @@ -414,9 +406,9 @@
"outputs": [],
"source": [
"# install packages through anaconda prompt\n",
"pip3 install tqdm\n",
"pip3 install dipy\n",
"pip3 install joblib"
"!pip3 install tqdm\n",
"!pip3 install dipy\n",
"!pip3 install joblib"
]
},
{
Expand Down