ATLAS v2.15.0

Main Features

• Concept Set annotations
• Temporal/Annual Prevalence in Cohort Characterization
• Cohort Demographics
• Shiny App packaging
• Caching of Permissions and Cohort / Concept Set lists to improve performance.

Specific documentation for the above features will be provided at a later time. The PRs and issues related to the above features can be found under the next section.

What's Changed

• Bypass refreshToken() when authentication is not enabled. by @chrisknoll in #2900
• Optimize Permission handling on ui by @chrisknoll in #2912
• Allow Observation Period in censor events. by @chrisknoll in #2931
• #2916 - Improvements to Docker Configurability of Atlas Application by @qcaas-nhs-sjt in #2917
• fix The Korean sentence order in Authorship description by @tandara0 in #2947
• Data Sources reports bug fixes by @amarsan in #2972
• Update nginx to 1.27.2 by @jmvizcainoio in #2974
• Clearer table boundaries on generate UI by @anthonysena in #2977
• Change concept set display in patient profile - fixes #2815 by @anthonysena in #2976
• IR generation button fixes by @anthonysena in #2979
• Allow read-only custom feature browsing by @anthonysena in #2975
• Have the Clear Server Cache button clear the cdm_cache and achilles_cache tables by @amarsan in #2980
• Extending a Concept Set with a new tab 'Annotations' by @alex-odysseus in #2971
• Switch clear-server cache button to clear webapi cache. by @chrisknoll in #2986
• Update cohort editor and viewer to render new fields from CIRCE 1.12.0 by @chrisknoll in #2989
• Fixed typos in criteria types for issue #2988. by @chrisknoll in #2992
• Adding UI to map non-Standard Concepts to the Standard ones to streamline Concept Set creation by @alex-odysseus in #2978
• Tools module functionality by @alex-odysseus in #2951
• Initial support for InterSystems IRIS data sources by @bdeboe in #2987
• Extending Cohort generation results with simple demographics available in Cohort Characterization by @alex-odysseus in #2959
• Removed duplicated modules. by @chrisknoll in #2998
• Cohort and analyses execution / generation listings extensions with a button to publish/download Shiny applications by @alex-odysseus in #2957
• Show left/right censor of cohort read-only view. by @chrisknoll in #3006
• Refresh auth token if user is actively using the Atlas UI by @pieterlukasse in #3002
• Fix: adjust attribute name "disable" to match what is defined in multi-select.js by @pieterlukasse in #3014
• Add better caching instruction to headers by @pieterlukasse in #3000
• Temporal annual distribution functionality and temporal FeatureExtraction capability enablement by @alex-odysseus in #2950

New Contributors

• @qcaas-nhs-sjt made their first contribution in #2917
• @tandara0 made their first contribution in #2947
• @amarsan made their first contribution in #2972
• @jmvizcainoio made their first contribution in #2974
• @bdeboe made their first contribution in #2987
• @pieterlukasse made their first contribution in #3002

Full Changelog: v2.14.0...v2.15.0