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2021 Python, Deep Archetypal Analysis (Bayesian NN, Deep Variational Autoencoder), Compressed Sensing, Kmeans, setuptools, tensorflow (keras), tensorflow_probability, sklearn (cluster, metrics, model_selection, preprocessing), pandas, typing

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MilenaOehlers/cluster-based-SISSO

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Cluster Based SISSO

This repository combines cluster extraction methods (Kmeans, DeepAA) with SISSO. With the former, representatives and corresponding clusters are extracted. Then, either multitask-SISSO is trained on all materials which are not in the test set, with tasks being defined by the extracted clusters, or singletask-SISSO is trained on the representatives only. As both Kmeans and DeepAA are stochastic algorithms, they should be applied multiple times to the same dataset; median test-RMSE of subsequent SISSO application then indicates the usefulness of the clustering algorithm with given parameters.

Installation prerequisites are:

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2021 Python, Deep Archetypal Analysis (Bayesian NN, Deep Variational Autoencoder), Compressed Sensing, Kmeans, setuptools, tensorflow (keras), tensorflow_probability, sklearn (cluster, metrics, model_selection, preprocessing), pandas, typing

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