We aim to determine the following points by the NGS data: 1. whether co-infection exist; 2. whether reassortment exist.
# H16 Nasal wash
# Donor Hamster # 5-Feb Nasal Wash#
BA.1 Donor 1 2 DPI N1
BA.1 Donor 2 2 DPI N2
BA.1 Donor 3 2 DPI N3
BA.2 Donor 4 2 DPI N4
BA.2 Donor 5 2 DPI N5
BA.2 Donor 6 2 DPI N6
# Direct contact Hamster # 6-Feb Nasal Wash#
Donor1&4 DC1 1 DPE N10
Donor2&5 DC2 1 DPE N11
Donor3&6 DC3 1 DPE N12
# Direct contact Hamster # 8-Feb Nasal Wash#
Donor1&4 DC1 3 DPE N22
Donor2&5 DC2 3 DPE N23
Donor3&6 DC3 3 DPE N24# BA.1-BA.2-coinfection-hamster