CodonMoE

(more details and paper link to be updated) CodonMoE is a Python package that implements Adaptive Mixture of Codon Reformative Experts (CodonMoE) for RNA analyses.

Installation

You can install CodonMoE using below command:

# pip install codonmoe
python setup.py install

API Reference

CodonMoE

CodonMoE(input_dim, num_experts=4, dropout_rate=0.1)

Parameters:

• input_dim: Dimension of the input features
• num_experts: Number of expert networks in the Mixture of Experts
• dropout_rate: Dropout rate for regularization

mRNAModel

mRNAModel(base_model, codon_moe)

Parameters:

• base_model: The base model to be integrated with CodonMoE
• codon_moe: The CodonMixture of Experts model

API Tests

python -m unittest tests/test_codon_moe.py