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KatjaKo/README.md

Hi there 👋 I am Katja,

a bioinformatician at the National Bioinformatics Infrastructure Sweden (NBIS).

I support researchers in bioinformatics by performing data analyses and providing training.

Mainly, I focus on analyzing metagenomic and metatranscriptomic data from diverse environments, including soil, gut, and oral microbiomes.

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  1. PacBio_AMF PacBio_AMF Public

    A workflow for processing CCS reads of AMF to ASVs using DADA2

    R 1 1

  2. CakeClub CakeClub Public

    Forked from ImmunTech/CakeClub

    SCSS

  3. FunMetGen FunMetGen Public

    This repository contains all the data and codes used for the analyses related to functional metagenomics using the SeqCap approach

    HTML

  4. NBISweden/workshop-data-visualization-r NBISweden/workshop-data-visualization-r Public

    Materials for NBIS workshop on advanced data visualization

    HTML 2 3

  5. captured-metatrans captured-metatrans Public

    This repository includes codes used in the analyses related to captured metatranscriptomics.

    HTML