This repository hosts current and past trainings for African Centers of Excellence by the NIAID / OCICB / BCBB.
- Please see the folders in the repo for notes and materials from individual bioinformatics classes.
- Wiki - visit the wiki for more general links and notes including feedback survey, curriculum design, et.
| Week No. | Web Training Time | Date | Instructor | Topic | Course | Date (british format) |
|---|---|---|---|---|---|---|
| 3 | 2 | 3-Feb-2020 | Dan Veltri | Intro to Deep Learning (TensorFlow and Keras) | Big Bio-data Analysis (Artificial Intelligence and Machine Learning) | 03.02.2020 |
| 3 | 2 | 6-Feb-2020 | Kurt Wollenberg | Dynamic programming and Alignment algorithms | Principles of Sequence analysis and Phylogenetics | 06.02.2020 |
| 4 | 2 | 10-Feb-2020 | Dan Veltri | Intro to Deep Learning (TensorFlow and Keras) | Big Bio-data Analysis (Artificial Intelligence and Machine Learning) | 10.02.2020 |
| 4 | 2 | 13-Feb-2020 | Kurt Wollenberg | Natural selection, genetic drift and measures of genetic diversity | Molecular Evolution | 13.02.2020 |
| 5 | 3 | 14-Feb-2020 | Kurt Wollenberg | Introduction to phylogenetics and phylogenetic tree inference methods (e.g. parsimony and Maximum Likelihood) | Principles of Sequence analysis and Phylogenetics | 17.02.2020 |
| 5 | 2 | 20-Feb-2020 | Eric Karlins | Linkage Disequilibrium | Population Genetics & Genomics | 20.02.2020 |
| 5 | 2 | 21-Feb-2020 | Yunhua Zhu | Gene Regulatory Networks | Systems Biology 2 | 21.02.2020 |
| 6 | 2 | 24-Feb-2020 | Dan Veltri | Intro to Deep Learning (TensorFlow and Keras) | Big Bio-data Analysis (Artificial Intelligence and Machine Learning) | 24.02.2020 |
| 6 | 2 | 27-Feb-2020 | Yunhua Zhu | Gene Regulatory Networks | Systems Biology 2 | 27.02.2020 |
| 6 | 2 | 28-Feb-2020 | Kurt Wollenberg | Hardy-Weinberg Equilibrium, Basic Population Genetics Coalescent Models | Population Genetics & Genomics | 28.02.2020 |
| 7 | 3 | 2-Mar-2020 | Dan Veltri | Common machine learning algorithms: Supervised learning, Unsupervised learning | Big Bio-data Analysis (Artificial Intelligence and Machine Learning) | 02.03.2020 |
| 7 | 3 | 5-Mar-2020 | Dan Veltri | Common machine learning algorithms: Supervised learning, Unsupervised learning | Big Bio-data Analysis (Artificial Intelligence and Machine Learning) | 05.03.2020 |
| 7 | 2 | 6-Mar-2020 | Kurt Wollenberg | Calculating evolutionary distances among sequences and correction models | Molecular Evolution | 06.03.2020 |
| 8 | 2 | 9-Mar-2020 | Burke Squires | Introduction to Bio Python | Python | 09.03.2020 |
| 8 | 2 | 12-Mar-2020 | Isaac Bishof | Network Structural Analysis | Systems Biology 2 | 12.03.2020 |
| 8 | 2 | 13-Mar-2020 | Kurt Wollenberg | Coalescent analysis and populations | Principles of Sequence analysis and Phylogenetics | 13.03.2020 |
| 9 | 1 or 2 | 16-Mar-2020 | Burke Squires | Sequence objects in BioPython | Python | 16.03.2020 |
| 9 | 2 | 19-Mar-2020 | Eric Karlins | Inferring Haplotype from Genotypes and Mendelian Randomization | Population Genetics & Genomics | 19.03.2020 |
| 9 | 3 | 20-Mar-2020 | Dan | Common machine learning algorithms: Supervised learning, Unsupervised learning | Big Bio-data Analysis (Artificial Intelligence and Machine Learning) | 20.03.2020 |
| 10 | 2 | 23-Mar-2020 | Yunhua / Isaac / Burke? | Structural Modelling and Analysis of Biochemical Networks | Systems Biology 2 | 23.03.2020 |
| 10 | 2 | 26-Mar-2020 | Andrew Oler | Haplotype-based Association Tests, Linkage Analysis for Binary Traits and Quantitative Traits | Population Genetics & Genomics | 26.03.2020 |
| 10 | 2 | 27-Mar-2020 | Kurt Wollenberg | Mechanisms of genomic evolution | Molecular Evolution | 27.03.2020 |
| 11 | 2 | 30-Mar-2020 | Burke Squires | Bio.PopGen: Population genetics | Python | 30.03.2020 |
| 11 | 2 | 2-Apr-2020 | Burke Squires | Graphics including GenomeDiagram | Python | 02.04.2020 |