๐งช Bioactivity Extraction and Analysis from ChEMBL This project retrieves bioactivity data for molecules similar to a given compound using the ChEMBL database. It extracts relevant information, such as chemical structures and biological activity values, to support research in medicinal chemistry and drug discovery.
๐ Features Searches for molecules similar to a given compound using the ChEMBL API.
Filters results based on a specified chemical similarity threshold.
Extracts bioactivity data, including assay type, standard values, and units.
Saves the results in a CSV file for further analysis.
Identifies the most frequently occurring assay description in the dataset.
๐ Requirements Python 3.8+
Pandas
ChEMBL Web Resource Client
๐ Installation bash Copiar Editar pip install pandas chembl_webresource_client ๐ฌ Usage python Copiar Editar python script.py The script will query ChEMBL, retrieve bioactivity data, and generate a bioactivity_data_filtered.csv file with the results. It will also display the most frequently occurring assay description.
๐ Expected Output A CSV file containing molecule and bioactivity information.
Console output showing the most repeated assay description and its frequency.
๐ License This project is licensed under the MIT License.