MutationDB, is a database of mutations of E-coli genomes under 178 culture conditions. The url for the database is: http://mutationdb.com/
The code for formating the mutation data collected from literature is the folder named 1_create_DB. The code for analyzing the mutation database is in the folder named 2_analysis_ML_visualation. The code for building machine learning models is in the folder named 3_ML
If you have any questions about this database, please contact Xiaokang Wang (kanwang@ucdavis.edu).