Beignet is a work-in-progress. Contributions and feedback are encouraged!

Beignet

A standard library for biological research.

Installation

pip install beignet

Requires Python 3.10 or later and PyTorch 2.2.0 or later.

Layout

• beignet: PyTorch operators
  • beignet.datasets: PyTorch datasets
  • beignet.func: composable PyTorch function transforms
  • beignet.lightning: Lightning modules
    • beignet.lightning.datamodules: Lightning datamodules
  • beignet.metrics: TorchMetrics metrics
    • beignet.metrics.functional: functional TorchMetrics metrics
  • beignet.nn: PyTorch modules
    • beignet.nn.functional:
  • beignet.optim: PyTorch optimizers
  • beignet.samplers: PyTorch samplers
  • beignet.transforms:
    • beignet.transforms.functional: