Raising Issues

This page will provide links to where an issue should be raised, if not covered in Common Issues.

In general, you should raise an issue in the relevant GitHub repository:

1. Napari plugin
   • Note that if you get a pop-up in Napari that says "Pipeline Failed", then this is likely to be an error with the Segment-Flow pipeline, so you should raise an issue there instead.
2. Segment-Flow (Nextflow) pipeline
3. Model registry
4. Utilities functions

Specific guidelines for raising issues, if applicable, will be in the README for each of the repos above, but generally it is helpful to provide as much information as possible, notably:

• A minimal working example to reproduce the error
• System information, such as OS, CPU architecture, CUDA version (if applicable) etc.
• Versions of all packages in the relevant Python environment
• Traceback of the error

If you are requesting a feature rather than reporting a bug, please provide the context for the request, desired behaviour, and expected utility. We may also ask for contact details to continue the discussion where appropriate.