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{2023.06}[icelake,cascadelake] EasyStacks batch 16: 060 - 068 #1072

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casparvl
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@casparvl casparvl commented May 4, 2025

This can be synced with upstream once #1071 is merged. Then, it can be built.

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eessi-bot bot commented May 4, 2025

Instance eessi-bot-mc-aws is configured to build for:

  • architectures: x86_64/generic, x86_64/intel/haswell, x86_64/intel/sapphirerapids, x86_64/intel/skylake_avx512, x86_64/intel/cascadelake, x86_64/intel/icelake, x86_64/amd/zen2, x86_64/amd/zen3, aarch64/generic, aarch64/neoverse_n1, aarch64/neoverse_v1
  • repositories: eessi.io-2023.06-compat, eessi.io-2023.06-software

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eessi-bot bot commented May 4, 2025

Instance eessi-bot-mc-azure is configured to build for:

  • architectures: x86_64/amd/zen4
  • repositories: eessi.io-2023.06-compat, eessi.io-2023.06-software

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eessi-bot-surf bot commented May 4, 2025

Instance eessi-bot-surf is configured to build for:

  • architectures: x86_64/amd/zen4, x86_64/amd/zen2
  • repositories: eessi-hpc.org-2023.06-software, eessi.io-2023.06-software, eessi.io-2023.06-compat, eessi-hpc.org-2023.06-compat

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Instance rt-Grace-jr is configured to build for:

  • architectures: aarch64/nvidia/grace
  • repositories: eessi.io-2023.06-software

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gpu-bot-ugent bot commented May 4, 2025

Instance eessi-bot-vsc-ugent is configured to build for:

  • architectures: x86_64/amd/zen3
  • repositories: eessi-hpc.org-2023.06-software, eessi.io-2023.06-compat, eessi-hpc.org-2023.06-compat, eessi.io-2023.06-software

@bedroge
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bedroge commented May 9, 2025

I don't think this depends on ReFrame (which still has to be built in #1080, split off from #1071), so it should be okay to build this one already.

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake
bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake

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eessi-bot bot commented May 9, 2025

Updates by the bot instance eessi-bot-mc-aws (click for details)
  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake
  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake
  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

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eessi-bot bot commented May 9, 2025

Updates by the bot instance eessi-bot-mc-azure (click for details)
  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake
  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake
  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

    • no jobs were submitted
  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

    • no jobs were submitted

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eessi-bot-surf bot commented May 9, 2025

Updates by the bot instance eessi-bot-surf (click for details)
  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake
  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake
  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

    • no jobs were submitted
  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

    • no jobs were submitted

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Updates by the bot instance rt-Grace-jr (click for details)
  • account bedroge has NO permission to send commands to the bot

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eessi-bot bot commented May 9, 2025

New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-icelake for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.05/pr_1072/61927

date job status comment
May 09 06:53:35 UTC 2025 submitted job id 61927 awaits release by job manager
May 09 06:54:36 UTC 2025 released job awaits launch by Slurm scheduler
May 09 06:59:48 UTC 2025 running job 61927 is running
May 09 16:47:25 UTC 2025 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-61927.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-icelake-17468066510.tar.gzsize: 3189 MiB (3344662761 bytes)
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other under 2023.06/software/linux/x86_64/intel/icelake
no other files in tarball
May 09 16:47:25 UTC 2025 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ OK ] ( 1/13) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.4-foss-2023b /b2b72766 @BotBuildTests:x86_64_intel_icelake+default
P: perf: 73.382 ns/day (r:0, l:None, u:None)
[ OK ] ( 2/13) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.3-foss-2023b /d2fe4ce3 @BotBuildTests:x86_64_intel_icelake+default
P: perf: 75.343 ns/day (r:0, l:None, u:None)
[ OK ] ( 3/13) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.1-foss-2023b /02920241 @BotBuildTests:x86_64_intel_icelake+default
P: perf: 61.815 ns/day (r:0, l:None, u:None)
[ OK ] ( 4/13) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:x86_64_intel_icelake+default
P: perf: 540.723 timesteps/s (r:0, l:None, u:None)
[ OK ] ( 5/13) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:x86_64_intel_icelake+default
P: perf: 580.414 timesteps/s (r:0, l:None, u:None)
[ OK ] ( 6/13) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:x86_64_intel_icelake+default
P: latency: 1.51 us (r:0, l:None, u:None)
[ OK ] ( 7/13) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:x86_64_intel_icelake+default
P: latency: 1.47 us (r:0, l:None, u:None)
[ OK ] ( 8/13) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:x86_64_intel_icelake+default
P: latency: 3.02 us (r:0, l:None, u:None)
[ OK ] ( 9/13) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:x86_64_intel_icelake+default
P: latency: 3.22 us (r:0, l:None, u:None)
[ OK ] (10/13) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:x86_64_intel_icelake+default
P: latency: 0.35 us (r:0, l:None, u:None)
[ OK ] (11/13) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:x86_64_intel_icelake+default
P: latency: 0.32 us (r:0, l:None, u:None)
[ OK ] (12/13) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:x86_64_intel_icelake+default
P: bandwidth: 13520.11 MB/s (r:0, l:None, u:None)
[ OK ] (13/13) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:x86_64_intel_icelake+default
P: bandwidth: 13881.31 MB/s (r:0, l:None, u:None)
[ PASSED ] Ran 13/13 test case(s) from 13 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-61927.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 10 15:13:47 UTC 2025 uploaded transfer of eessi-2023.06-software-linux-x86_64-intel-icelake-17468066510.tar.gz to S3 bucket succeeded

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eessi-bot bot commented May 9, 2025

New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-cascadelake for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.05/pr_1072/61928

date job status comment
May 09 06:53:41 UTC 2025 submitted job id 61928 awaits release by job manager
May 09 06:54:34 UTC 2025 released job awaits launch by Slurm scheduler
May 09 06:59:45 UTC 2025 running job 61928 is running
May 09 15:16:40 UTC 2025 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-61928.out
✅ no message matching FATAL:
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-cascadelake-17468015180.tar.gzsize: 1962 MiB (2057695329 bytes)
entries: 114231
modules under 2023.06/software/linux/x86_64/intel/cascadelake/modules/all
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Archive-Zip/1.68-GCCcore-12.2.0.lua
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Arrow/16.1.0-gfbf-2023b.lua
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kim-api/2.3.0-GCC-13.2.0.lua
KronaTools/2.8.1-GCCcore-12.2.0.lua
LAMMPS/29Aug2024-foss-2023b-kokkos.lua
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other under 2023.06/software/linux/x86_64/intel/cascadelake
no other files in tarball
May 09 15:16:40 UTC 2025 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ OK ] ( 1/12) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.3-foss-2023b /d2fe4ce3 @BotBuildTests:x86_64_intel_cascadelake+default
P: perf: 59.095 ns/day (r:0, l:None, u:None)
[ OK ] ( 2/12) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.1-foss-2023b /02920241 @BotBuildTests:x86_64_intel_cascadelake+default
P: perf: 58.951 ns/day (r:0, l:None, u:None)
[ OK ] ( 3/12) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:x86_64_intel_cascadelake+default
P: perf: 409.048 timesteps/s (r:0, l:None, u:None)
[ OK ] ( 4/12) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:x86_64_intel_cascadelake+default
P: perf: 428.394 timesteps/s (r:0, l:None, u:None)
[ OK ] ( 5/12) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:x86_64_intel_cascadelake+default
P: latency: 1.92 us (r:0, l:None, u:None)
[ OK ] ( 6/12) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:x86_64_intel_cascadelake+default
P: latency: 1.82 us (r:0, l:None, u:None)
[ OK ] ( 7/12) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:x86_64_intel_cascadelake+default
P: latency: 3.56 us (r:0, l:None, u:None)
[ OK ] ( 8/12) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:x86_64_intel_cascadelake+default
P: latency: 3.71 us (r:0, l:None, u:None)
[ OK ] ( 9/12) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:x86_64_intel_cascadelake+default
P: latency: 0.47 us (r:0, l:None, u:None)
[ OK ] (10/12) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:x86_64_intel_cascadelake+default
P: latency: 0.46 us (r:0, l:None, u:None)
[ OK ] (11/12) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:x86_64_intel_cascadelake+default
P: bandwidth: 10238.43 MB/s (r:0, l:None, u:None)
[ OK ] (12/12) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:x86_64_intel_cascadelake+default
P: bandwidth: 10129.77 MB/s (r:0, l:None, u:None)
[ PASSED ] Ran 12/12 test case(s) from 12 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-61928.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@bedroge bedroge marked this pull request as ready for review May 9, 2025 07:58
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bedroge commented May 9, 2025

For cascade lake, one GROMACS 2024.4 test failed:

The following tests FAILED:
          2 - GmxapiMpiTests (Failed)

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bedroge commented May 9, 2025

And we may want to check if LAMMPS picked the right Kokkos CPU. Looks like it used SKX (skylake + avx512) for both, while it seems that it could have used ICL for Icelake:
https://github.com/lammps/lammps/blob/stable_29Aug2024/lib/kokkos/cmake/kokkos_arch.cmake#L55

edit: looks like support for Icelake was missing in the LAMMPS easyblock, it was added in the EB5:
easybuilders/easybuild-easyblocks@f50e765
So we may want to rebuild with a newer easyblock (but we can do that in a follow-up PR)?

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bedroge commented May 9, 2025

I haven't really looked into the failing GROMACS test, but I think we've seen before that it may just work if we try it again, so let's do another build overnight...

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake

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eessi-bot bot commented May 9, 2025

Updates by the bot instance eessi-bot-mc-aws (click for details)
  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

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eessi-bot bot commented May 9, 2025

New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-cascadelake for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.05/pr_1072/61951

date job status comment
May 09 21:09:51 UTC 2025 submitted job id 61951 awaits release by job manager
May 09 21:10:51 UTC 2025 released job awaits launch by Slurm scheduler
May 09 21:16:54 UTC 2025 running job 61951 is running
May 10 09:17:50 UTC 2025 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-61951.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-cascadelake-17468656340.tar.gzsize: 3191 MiB (3346550687 bytes)
entries: 229278
modules under 2023.06/software/linux/x86_64/intel/cascadelake/modules/all
Abseil/20240116.1-GCCcore-13.2.0.lua
Archive-Zip/1.68-GCCcore-12.2.0.lua
archspec/0.2.2-GCCcore-13.2.0.lua
Arrow/16.1.0-gfbf-2023b.lua
BamTools/2.5.2-GCC-12.2.0.lua
basemap/1.3.9-foss-2023a.lua
BCFtools/1.17-GCC-12.2.0.lua
Bio-DB-HTS/3.01-GCC-12.2.0.lua
Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0.lua
bokeh/3.2.1-foss-2022b.lua
Bowtie2/2.5.1-GCC-12.2.0.lua
CapnProto/0.10.3-GCCcore-12.2.0.lua
Cassiopeia/2.0.0-foss-2023a.lua
ccache/4.9-GCCcore-12.3.0.lua
CD-HIT/4.8.1-GCC-12.2.0.lua
CGAL/5.5.2-GCCcore-12.2.0.lua
cooler/0.10.2-foss-2023b.lua
CubeLib/4.8.2-GCCcore-13.2.0.lua
CubeWriter/4.8.2-GCCcore-13.2.0.lua
Cython/3.0.10-GCCcore-13.2.0.lua
dask/2023.7.1-foss-2022b.lua
dill/0.3.8-GCCcore-13.2.0.lua
elfutils/0.189-GCCcore-12.2.0.lua
elfutils/0.189-GCCcore-12.3.0.lua
ETE/3.1.3-foss-2023a.lua
fastp/0.23.4-GCC-12.2.0.lua
FFmpeg/6.0-GCCcore-13.2.0.lua
ffnvcodec/12.1.14.0.lua
FLTK/1.3.8-GCCcore-12.3.0.lua
freeglut/3.4.0-GCCcore-12.2.0.lua
freeglut/3.4.0-GCCcore-12.3.0.lua
FreeImage/3.18.0-GCCcore-12.3.0.lua
GDB/13.2-GCCcore-12.3.0.lua
GDRCopy/2.4-GCCcore-13.2.0.lua
GenomeTools/1.6.2-GCC-12.2.0.lua
GL2PS/1.4.2-GCCcore-12.2.0.lua
GL2PS/1.4.2-GCCcore-12.3.0.lua
gmsh/4.12.2-foss-2023a.lua
Graphene/1.10.8-GCCcore-12.2.0.lua
Graphene/1.10.8-GCCcore-12.3.0.lua
GROMACS/2024.3-foss-2023b.lua
GROMACS/2024.4-foss-2023b.lua
GST-plugins-base/1.22.1-GCC-12.2.0.lua
GST-plugins-base/1.22.5-GCC-12.3.0.lua
GStreamer/1.22.1-GCC-12.2.0.lua
GStreamer/1.22.5-GCC-12.3.0.lua
h5py/3.11.0-foss-2023b.lua
hatch-jupyter-builder/0.9.1-GCCcore-12.3.0.lua
hic-straw/1.3.1-foss-2023b.lua
hiredis/1.2.0-GCCcore-12.3.0.lua
HTSlib/1.17-GCC-12.2.0.lua
ISA-L/2.30.0-GCCcore-12.2.0.lua
ISL/0.26-GCCcore-12.3.0.lua
jedi/0.19.0-GCCcore-12.3.0.lua
jemalloc/5.3.0-GCCcore-12.2.0.lua
Judy/1.0.5-GCCcore-12.2.0.lua
KaHIP/3.14-gompi-2022b.lua
kim-api/2.3.0-GCC-13.2.0.lua
KronaTools/2.8.1-GCCcore-12.2.0.lua
LAMMPS/29Aug2024-foss-2023b-kokkos.lua
libaio/0.3.113-GCCcore-12.2.0.lua
libidn2/2.3.7-GCCcore-12.3.0.lua
libyaml/0.2.5-GCCcore-12.2.0.lua
LightGBM/4.5.0-foss-2023a.lua
lpsolve/5.5.2.11-GCC-12.2.0.lua
MAFFT/7.505-GCC-12.2.0-with-extensions.lua
Mash/2.3-GCC-12.2.0.lua
maturin/1.5.0-GCCcore-13.2.0-Rust-1.76.0.lua
MDI/1.4.29-gompi-2023b.lua
meson-python/0.11.0-GCCcore-12.2.0.lua
MetaEuk/6-GCC-12.2.0.lua
METIS/5.1.0-GCCcore-12.2.0.lua
MPC/1.3.1-GCCcore-12.2.0.lua
mpl-ascii/0.10.0-gfbf-2023a.lua
multiprocess/0.70.16-gfbf-2023b.lua
MultiQC/1.14-foss-2022b.lua
MUMPS/5.6.1-foss-2022b-metis.lua
Mustache/1.3.3-foss-2023b.lua
ncbi-vdb/3.0.5-gompi-2022b.lua
netcdf4-python/1.6.3-foss-2022b.lua
occt/7.8.0-GCCcore-12.3.0.lua
OPARI2/2.0.8-GCCcore-13.2.0.lua
OpenFOAM/v2406-foss-2023a.lua
OTF2/3.0.3-GCCcore-13.2.0.lua
parallel/20230722-GCCcore-12.2.0.lua
Paraver/4.11.4-GCC-12.3.0.lua
PDT/3.25.2-GCCcore-13.2.0.lua
PLUMED/2.9.2-foss-2023b.lua
pydantic/2.7.4-GCCcore-13.2.0.lua
pyfaidx/0.7.2.1-GCCcore-12.2.0.lua
pyfaidx/0.8.1.1-GCCcore-13.2.0.lua
Pysam/0.21.0-GCC-12.2.0.lua
python-isal/1.1.0-GCCcore-12.2.0.lua
PyYAML/6.0-GCCcore-12.2.0.lua
RapidJSON/1.1.0-20240409-GCCcore-13.2.0.lua
RE2/2024-03-01-GCCcore-13.2.0.lua
ROOT/6.26.10-foss-2022b.lua
ROOT/6.30.06-foss-2023a.lua
Ruby/3.2.2-GCCcore-12.2.0.lua
Rust/1.76.0-GCCcore-13.2.0.lua
SAMtools/1.17-GCC-12.2.0.lua
ScaFaCoS/1.0.4-foss-2023b.lua
scikit-build-core/0.9.3-GCCcore-12.3.0.lua
Score-P/8.4-gompi-2023b.lua
SCOTCH/7.0.3-gompi-2022b.lua
SDL2/2.28.5-GCCcore-13.2.0.lua
setuptools/64.0.3-GCCcore-12.2.0.lua
SIONlib/1.7.7-GCCcore-13.2.0-tools.lua
SLEPc/3.20.1-foss-2023a.lua
SlurmViewer/1.0.1-GCCcore-13.2.0.lua
Solids4foam/2.1-foss-2023a.lua
statsmodels/0.14.1-gfbf-2023a.lua
statsmodels/0.14.1-gfbf-2023b.lua
tbb/2021.10.0-GCCcore-12.2.0.lua
tbb/2021.13.0-GCCcore-13.2.0.lua
tmux/3.3a-GCCcore-12.3.0.lua
typing-extensions/4.10.0-GCCcore-13.2.0.lua
utf8proc/2.9.0-GCCcore-13.2.0.lua
VCFtools/0.1.16-GCC-12.2.0.lua
Vim/9.1.0004-GCCcore-12.3.0.lua
Voro++/0.4.6-GCCcore-13.2.0.lua
VTK/9.3.0-foss-2023b.lua
waLBerla/6.1-foss-2023a.lua
wget/1.24.5-GCCcore-12.3.0.lua
WhatsHap/2.1-foss-2022b.lua
wxWidgets/3.2.2.1-GCC-12.2.0.lua
wxWidgets/3.2.2.1-GCC-12.3.0.lua
x264/20231019-GCCcore-13.2.0.lua
x265/3.5-GCCcore-13.2.0.lua
xprop/1.2.6-GCCcore-12.3.0.lua
Yasm/1.3.0-GCCcore-13.2.0.lua
Z3/4.12.2-GCCcore-12.2.0.lua
Zip/3.0-GCCcore-12.2.0.lua
software under 2023.06/software/linux/x86_64/intel/cascadelake/software
Abseil/20240116.1-GCCcore-13.2.0
Archive-Zip/1.68-GCCcore-12.2.0
archspec/0.2.2-GCCcore-13.2.0
Arrow/16.1.0-gfbf-2023b
BamTools/2.5.2-GCC-12.2.0
basemap/1.3.9-foss-2023a
BCFtools/1.17-GCC-12.2.0
Bio-DB-HTS/3.01-GCC-12.2.0
Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0
bokeh/3.2.1-foss-2022b
Bowtie2/2.5.1-GCC-12.2.0
CapnProto/0.10.3-GCCcore-12.2.0
Cassiopeia/2.0.0-foss-2023a
ccache/4.9-GCCcore-12.3.0
CD-HIT/4.8.1-GCC-12.2.0
CGAL/5.5.2-GCCcore-12.2.0
cooler/0.10.2-foss-2023b
CubeLib/4.8.2-GCCcore-13.2.0
CubeWriter/4.8.2-GCCcore-13.2.0
Cython/3.0.10-GCCcore-13.2.0
dask/2023.7.1-foss-2022b
dill/0.3.8-GCCcore-13.2.0
elfutils/0.189-GCCcore-12.2.0
elfutils/0.189-GCCcore-12.3.0
ETE/3.1.3-foss-2023a
fastp/0.23.4-GCC-12.2.0
FFmpeg/6.0-GCCcore-13.2.0
ffnvcodec/12.1.14.0
FLTK/1.3.8-GCCcore-12.3.0
freeglut/3.4.0-GCCcore-12.2.0
freeglut/3.4.0-GCCcore-12.3.0
FreeImage/3.18.0-GCCcore-12.3.0
GDB/13.2-GCCcore-12.3.0
GDRCopy/2.4-GCCcore-13.2.0
GenomeTools/1.6.2-GCC-12.2.0
GL2PS/1.4.2-GCCcore-12.2.0
GL2PS/1.4.2-GCCcore-12.3.0
gmsh/4.12.2-foss-2023a
Graphene/1.10.8-GCCcore-12.2.0
Graphene/1.10.8-GCCcore-12.3.0
GROMACS/2024.3-foss-2023b
GROMACS/2024.4-foss-2023b
GST-plugins-base/1.22.1-GCC-12.2.0
GST-plugins-base/1.22.5-GCC-12.3.0
GStreamer/1.22.1-GCC-12.2.0
GStreamer/1.22.5-GCC-12.3.0
h5py/3.11.0-foss-2023b
hatch-jupyter-builder/0.9.1-GCCcore-12.3.0
hic-straw/1.3.1-foss-2023b
hiredis/1.2.0-GCCcore-12.3.0
HTSlib/1.17-GCC-12.2.0
ISA-L/2.30.0-GCCcore-12.2.0
ISL/0.26-GCCcore-12.3.0
jedi/0.19.0-GCCcore-12.3.0
jemalloc/5.3.0-GCCcore-12.2.0
Judy/1.0.5-GCCcore-12.2.0
KaHIP/3.14-gompi-2022b
kim-api/2.3.0-GCC-13.2.0
KronaTools/2.8.1-GCCcore-12.2.0
LAMMPS/29Aug2024-foss-2023b-kokkos
libaio/0.3.113-GCCcore-12.2.0
libidn2/2.3.7-GCCcore-12.3.0
libyaml/0.2.5-GCCcore-12.2.0
LightGBM/4.5.0-foss-2023a
lpsolve/5.5.2.11-GCC-12.2.0
MAFFT/7.505-GCC-12.2.0-with-extensions
Mash/2.3-GCC-12.2.0
maturin/1.5.0-GCCcore-13.2.0-Rust-1.76.0
MDI/1.4.29-gompi-2023b
meson-python/0.11.0-GCCcore-12.2.0
MetaEuk/6-GCC-12.2.0
METIS/5.1.0-GCCcore-12.2.0
MPC/1.3.1-GCCcore-12.2.0
mpl-ascii/0.10.0-gfbf-2023a
multiprocess/0.70.16-gfbf-2023b
MultiQC/1.14-foss-2022b
MUMPS/5.6.1-foss-2022b-metis
Mustache/1.3.3-foss-2023b
ncbi-vdb/3.0.5-gompi-2022b
netcdf4-python/1.6.3-foss-2022b
occt/7.8.0-GCCcore-12.3.0
OPARI2/2.0.8-GCCcore-13.2.0
OpenFOAM/v2406-foss-2023a
OTF2/3.0.3-GCCcore-13.2.0
parallel/20230722-GCCcore-12.2.0
Paraver/4.11.4-GCC-12.3.0
PDT/3.25.2-GCCcore-13.2.0
PLUMED/2.9.2-foss-2023b
pydantic/2.7.4-GCCcore-13.2.0
pyfaidx/0.7.2.1-GCCcore-12.2.0
pyfaidx/0.8.1.1-GCCcore-13.2.0
Pysam/0.21.0-GCC-12.2.0
python-isal/1.1.0-GCCcore-12.2.0
PyYAML/6.0-GCCcore-12.2.0
RapidJSON/1.1.0-20240409-GCCcore-13.2.0
RE2/2024-03-01-GCCcore-13.2.0
ROOT/6.26.10-foss-2022b
ROOT/6.30.06-foss-2023a
Ruby/3.2.2-GCCcore-12.2.0
Rust/1.76.0-GCCcore-13.2.0
SAMtools/1.17-GCC-12.2.0
ScaFaCoS/1.0.4-foss-2023b
scikit-build-core/0.9.3-GCCcore-12.3.0
Score-P/8.4-gompi-2023b
SCOTCH/7.0.3-gompi-2022b
SDL2/2.28.5-GCCcore-13.2.0
setuptools/64.0.3-GCCcore-12.2.0
SIONlib/1.7.7-GCCcore-13.2.0-tools
SLEPc/3.20.1-foss-2023a
SlurmViewer/1.0.1-GCCcore-13.2.0
Solids4foam/2.1-foss-2023a
statsmodels/0.14.1-gfbf-2023a
statsmodels/0.14.1-gfbf-2023b
tbb/2021.10.0-GCCcore-12.2.0
tbb/2021.13.0-GCCcore-13.2.0
tmux/3.3a-GCCcore-12.3.0
typing-extensions/4.10.0-GCCcore-13.2.0
utf8proc/2.9.0-GCCcore-13.2.0
VCFtools/0.1.16-GCC-12.2.0
Vim/9.1.0004-GCCcore-12.3.0
Voro++/0.4.6-GCCcore-13.2.0
VTK/9.3.0-foss-2023b
waLBerla/6.1-foss-2023a
wget/1.24.5-GCCcore-12.3.0
WhatsHap/2.1-foss-2022b
wxWidgets/3.2.2.1-GCC-12.2.0
wxWidgets/3.2.2.1-GCC-12.3.0
x264/20231019-GCCcore-13.2.0
x265/3.5-GCCcore-13.2.0
xprop/1.2.6-GCCcore-12.3.0
Yasm/1.3.0-GCCcore-13.2.0
Z3/4.12.2-GCCcore-12.2.0
Zip/3.0-GCCcore-12.2.0
other under 2023.06/software/linux/x86_64/intel/cascadelake
no other files in tarball
May 10 09:17:50 UTC 2025 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ OK ] ( 1/13) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.4-foss-2023b /b2b72766 @BotBuildTests:x86_64_intel_cascadelake+default
P: perf: 58.618 ns/day (r:0, l:None, u:None)
[ OK ] ( 2/13) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.3-foss-2023b /d2fe4ce3 @BotBuildTests:x86_64_intel_cascadelake+default
P: perf: 58.775 ns/day (r:0, l:None, u:None)
[ OK ] ( 3/13) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.1-foss-2023b /02920241 @BotBuildTests:x86_64_intel_cascadelake+default
P: perf: 58.58 ns/day (r:0, l:None, u:None)
[ OK ] ( 4/13) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:x86_64_intel_cascadelake+default
P: perf: 409.216 timesteps/s (r:0, l:None, u:None)
[ OK ] ( 5/13) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:x86_64_intel_cascadelake+default
P: perf: 427.46 timesteps/s (r:0, l:None, u:None)
[ OK ] ( 6/13) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:x86_64_intel_cascadelake+default
P: latency: 1.92 us (r:0, l:None, u:None)
[ OK ] ( 7/13) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:x86_64_intel_cascadelake+default
P: latency: 2.18 us (r:0, l:None, u:None)
[ OK ] ( 8/13) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:x86_64_intel_cascadelake+default
P: latency: 4.11 us (r:0, l:None, u:None)
[ OK ] ( 9/13) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:x86_64_intel_cascadelake+default
P: latency: 4.0 us (r:0, l:None, u:None)
[ OK ] (10/13) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:x86_64_intel_cascadelake+default
P: latency: 0.49 us (r:0, l:None, u:None)
[ OK ] (11/13) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:x86_64_intel_cascadelake+default
P: latency: 0.45 us (r:0, l:None, u:None)
[ OK ] (12/13) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:x86_64_intel_cascadelake+default
P: bandwidth: 10135.78 MB/s (r:0, l:None, u:None)
[ OK ] (13/13) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:x86_64_intel_cascadelake+default
P: bandwidth: 10149.98 MB/s (r:0, l:None, u:None)
[ PASSED ] Ran 13/13 test case(s) from 13 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-61951.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 10 15:14:40 UTC 2025 uploaded transfer of eessi-2023.06-software-linux-x86_64-intel-cascadelake-17468656340.tar.gz to S3 bucket succeeded

@bedroge bedroge added the bot:deploy Ask bot to deploy missing software installations to EESSI label May 10, 2025
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@bedroge bedroge merged commit b15cf70 into EESSI:2023.06-software.eessi.io May 10, 2025
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eessi-bot bot commented May 10, 2025

PR merged! Moved ['/project/def-users/SHARED/jobs/2025.05/pr_1072/61927', '/project/def-users/SHARED/jobs/2025.05/pr_1072/61928', '/project/def-users/SHARED/jobs/2025.05/pr_1072/61951'] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2025.05.10

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eessi-bot bot commented May 12, 2025

Updates by the bot instance eessi-bot-mc-azure (click for details)
  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake
  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

    • no jobs were submitted

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eessi-bot bot commented May 12, 2025

PR merged! Moved [] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2025.05.12

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