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Releases: DiseaseTranscriptomicsLab/betAS

v1.2.1

22 Feb 14:04
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Minor changes

  • Fix bug causing rMATS PSI values to range between 0 and 1 instead of 0 and 100 when using only one group.

v1.2.0

16 Jan 11:08
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Minor changes

  • Introduce the seed parameter to ensure reproducibility (default:TRUE).
  • Introduce the CoverageWeight parameter, allowing weighting of emitted points based on sample coverage (default: FALSE).
  • Address and resolve bugs causing errors during the deployment of the R package.

v1.1.1

19 Nov 22:42
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Minor changes

  • Fix bug preventing load of rMATS files

v1.1.0

10 Nov 15:42
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Minor changes

  • Combined redundant functions (process data) into one
  • Improvement of function documentation & data availability
  • Fix whippet bug (resulting in loading the dataset twice)
  • Default events in the main tab now based on existing events from input table (default: only exon skipping)
  • Trigger/warning messages for several cases that were not contemplated, resulting in a long time of data loading or app crashing
  • Improvements in functions’ efficiency
  • Option to download data (currently only for tables)

v1.0.1

18 May 11:01
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Minor changes:

  • Bug fix: betAS app now allows for user-input whippet files

v1.0.0

17 May 09:19
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Major changes:

  • Support for whippet inclusion tables
  • Allow user to filter inclusion tables based on minimum number of total corrected reads (inclusion and exclusion reads)
  • New example datasets for each tool

Minor changes:

  • Automatic detection of source tool
  • Bug fix: Automatic grouping based on sample name now works as expected
  • Bug fix: rMATS volcano plots are now correct

v0.4.0

20 Mar 17:22
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  • Support for rMATS inclusion tables
  • Minor changes

v0.3

03 Mar 18:41
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Multiple-group add-on