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@Clinical-Virology-Unit

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  1. a3partitioner a3partitioner Public

    A bioinformatics tool for creating APOBEC3 and non-APOBEC3 partitions from sequence alignments.

    Python 1

  2. ebolaseq ebolaseq Public

    EbolaSeq: A command-line tool for analyzing Ebola virus sequences. It automates sequence retrieval from NCBI GenBank, processing, alignment, and phylogenetic tree generation.

    Python 1

  3. LassaSeq LassaSeq Public

    LassaSeq: A command-line tool for analyzing Lassa virus sequences. It automates sequence retrieval from NCBI GenBank, processing, alignment and phylogenetic tree generation, with special handling f…

    Python 1

  4. viralrecon viralrecon Public

    Forked from nf-core/viralrecon

    Assembly and intrahost/low-frequency variant calling for viral samples

    Nextflow 1