All example data for the TAPAS PhysIO Toolbox is in this repository. You can download the examples by cloning this repository as
git clone https://github.com/ComputationalPsychiatry/PhysIO-Examples.git
The general folder structure is
<vendor>/<modality>/
where:
-
<vendor>could be a scanner vendor (Siemens, Philips, GE...) or a manufacturer of peripheral devices (BioPac, ADInstruments), as well as a data standard (BIDS) -
<modality>describes the scan modality (3 Tesla, 7 Tesla) as well as the recording modality (PPU, ECG) combined, e.g.,PPU-3T -
Within each of these folders, you will find:
- the raw physiological logfiles
- example scripts to run PhysIO in 3 formats:
- SPM job (
*spm_job.mat) - editable SPM job (
*spm_job.m) - plain matlab script (
*matlab_script.m)
- SPM job (
-
Each example shall be run directly from within its individual folders.
- The relative paths have been automatically updated, based on the template jobs in the examples subfolder of the PhysIO code repository
-
A description of the individual examples (vendor, origin, etc.) is found on this PhysIO Wiki Page - Examples