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Remove direct dependency on SciMLBase #1159

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102 changes: 54 additions & 48 deletions .buildkite/Manifest-v1.11.toml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -341,21 +341,27 @@ version = "0.10.15"

[[deps.CUDA]]
deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "Crayons", "DataFrames", "ExprTools", "GPUArrays", "GPUCompiler", "GPUToolbox", "KernelAbstractions", "LLVM", "LLVMLoopInfo", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "NVTX", "Preferences", "PrettyTables", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "StaticArrays", "Statistics", "demumble_jll"]
git-tree-sha1 = "ee44b6eaaf518e8001ed6ed1d08a04662d63a242"
git-tree-sha1 = "bb1878ad25badd8e36e0f491ddf3fa5e3c7c34a5"
uuid = "052768ef-5323-5732-b1bb-66c8b64840ba"
version = "5.7.3"
weakdeps = ["ChainRulesCore", "EnzymeCore", "SpecialFunctions"]
version = "5.8.1"

[deps.CUDA.extensions]
ChainRulesCoreExt = "ChainRulesCore"
EnzymeCoreExt = "EnzymeCore"
SparseMatricesCSRExt = "SparseMatricesCSR"
SpecialFunctionsExt = "SpecialFunctions"

[deps.CUDA.weakdeps]
ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
EnzymeCore = "f151be2c-9106-41f4-ab19-57ee4f262869"
SparseMatricesCSR = "a0a7dd2c-ebf4-11e9-1f05-cf50bc540ca1"
SpecialFunctions = "276daf66-3868-5448-9aa4-cd146d93841b"

[[deps.CUDA_Driver_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "f69205592dbd3721a156245b6dd837206786a848"
git-tree-sha1 = "5129b555ff876c47ad9e53bcd86e9a94bcc12ea4"
uuid = "4ee394cb-3365-5eb0-8335-949819d2adfc"
version = "0.12.1+1"
version = "0.13.0+0"

[[deps.CUDA_Runtime_Discovery]]
deps = ["Libdl"]
Expand All @@ -365,9 +371,9 @@ version = "0.3.5"

[[deps.CUDA_Runtime_jll]]
deps = ["Artifacts", "CUDA_Driver_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"]
git-tree-sha1 = "99f1c6b659c14bbb3492246791bb4928a40ceb84"
git-tree-sha1 = "28126781294b2f31bc815f96922d680426e3a0bc"
uuid = "76a88914-d11a-5bdc-97e0-2f5a05c973a2"
version = "0.16.1+0"
version = "0.17.0+0"

[[deps.Cairo]]
deps = ["Cairo_jll", "Colors", "Glib_jll", "Graphics", "Libdl", "Pango_jll"]
Expand Down Expand Up @@ -428,9 +434,9 @@ version = "0.0.16"

[[deps.ClimaComms]]
deps = ["Adapt", "Logging", "LoggingExtras"]
git-tree-sha1 = "40ad44466dfe0092e18c04bc02c849fe8e095d30"
git-tree-sha1 = "2a96bdd5339bdcd903867a46d1f00110f7b890cc"
uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d"
version = "0.6.6"
version = "0.6.7"
weakdeps = ["CUDA", "MPI"]

[deps.ClimaComms.extensions]
Expand Down Expand Up @@ -473,15 +479,15 @@ weakdeps = ["BSON", "CSV", "ClimaParams", "DataFrames", "Flux", "HTTP", "StatsBa

[[deps.ClimaParams]]
deps = ["TOML"]
git-tree-sha1 = "7613d47b4f96307845cbe377dede19efa3256cfb"
git-tree-sha1 = "acf6c80c7ad59fe9dac9cc49625d52f4b8e1f4b7"
uuid = "5c42b081-d73a-476f-9059-fd94b934656c"
version = "0.10.29"
version = "0.10.30"

[[deps.ClimaTimeSteppers]]
deps = ["ClimaComms", "DataStructures", "DiffEqBase", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"]
git-tree-sha1 = "f71d6c31fdfeaa66516ccf904a916e99904e5078"
git-tree-sha1 = "23c8346606e165aa8805f25063f24e39bd8e148d"
uuid = "595c0a79-7f3d-439a-bc5a-b232dc3bde79"
version = "0.8.4"
version = "0.8.5"
weakdeps = ["BenchmarkTools", "CUDA", "OrderedCollections", "PrettyTables", "StatsBase"]

[deps.ClimaTimeSteppers.extensions]
Expand Down Expand Up @@ -714,9 +720,9 @@ version = "1.9.1"

[[deps.DiffEqBase]]
deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "FastPower", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "TruncatedStacktraces"]
git-tree-sha1 = "575a4b945c26f654625c9bc58a1ed10a4eddd267"
git-tree-sha1 = "1bcd3a5c585c477e5d0595937ea7b5adcda6c621"
uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
version = "6.173.0"
version = "6.174.0"

[deps.DiffEqBase.extensions]
DiffEqBaseCUDAExt = "CUDA"
Expand Down Expand Up @@ -919,9 +925,9 @@ uuid = "55351af7-c7e9-48d6-89ff-24e801d99491"
version = "0.10.14"

[[deps.Extents]]
git-tree-sha1 = "063512a13dbe9c40d999c439268539aa552d1ae6"
git-tree-sha1 = "b309b36a9e02fe7be71270dd8c0fd873625332b4"
uuid = "411431e0-e8b7-467b-b5e0-f676ba4f2910"
version = "0.1.5"
version = "0.1.6"

[[deps.FFMPEG]]
deps = ["FFMPEG_jll"]
Expand Down Expand Up @@ -1167,9 +1173,9 @@ version = "0.2.0"

[[deps.GPUCompiler]]
deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "PrecompileTools", "Preferences", "Scratch", "Serialization", "TOML", "Tracy", "UUIDs"]
git-tree-sha1 = "43c2e60efa2badefe7a32a50b586b4ac1b8b8249"
git-tree-sha1 = "3651909714fc4d5a005294d4781b2313ffc2913b"
uuid = "61eb1bfa-7361-4325-ad38-22787b887f55"
version = "1.4.0"
version = "1.5.0"

[[deps.GPUToolbox]]
git-tree-sha1 = "15d8b0f5a6dca9bf8c02eeaf6687660dafa638d0"
Expand Down Expand Up @@ -1213,9 +1219,9 @@ version = "1.0.2"

[[deps.GeoJSON]]
deps = ["Extents", "GeoFormatTypes", "GeoInterface", "GeoInterfaceMakie", "GeoInterfaceRecipes", "JSON3", "StructTypes", "Tables"]
git-tree-sha1 = "e17756f8cb7f2356adfe940a6cf82f4c33c88c4c"
git-tree-sha1 = "c803640368acf4ae02bb5a69a986cecc4a5cb984"
uuid = "61d90e0f-e114-555e-ac52-39dfb47a3ef9"
version = "0.8.2"
version = "0.8.3"
weakdeps = ["Makie"]

[deps.GeoJSON.extensions]
Expand All @@ -1240,10 +1246,10 @@ uuid = "5c1252a2-5f33-56bf-86c9-59e7332b4326"
version = "0.4.11"

[[deps.GeometryOps]]
deps = ["AbstractTrees", "AdaptivePredicates", "CoordinateTransformations", "DataAPI", "DelaunayTriangulation", "ExactPredicates", "Extents", "GeoFormatTypes", "GeoInterface", "GeometryBasics", "GeometryOpsCore", "LinearAlgebra", "SortTileRecursiveTree", "Statistics", "Tables"]
git-tree-sha1 = "14469166fe57ca6f4aeb976bb1f4dc4d3afa3ee3"
deps = ["AbstractTrees", "AdaptivePredicates", "CoordinateTransformations", "DataAPI", "DelaunayTriangulation", "ExactPredicates", "Extents", "GeoFormatTypes", "GeoInterface", "GeometryOpsCore", "LinearAlgebra", "SortTileRecursiveTree", "StaticArrays", "Statistics", "Tables"]
git-tree-sha1 = "bd182936ad204652a5318d360c7cfc7772b17e7a"
uuid = "3251bfac-6a57-4b6d-aa61-ac1fef2975ab"
version = "0.1.24"
version = "0.1.25"

[deps.GeometryOps.extensions]
GeometryOpsDataFramesExt = "DataFrames"
Expand All @@ -1261,9 +1267,9 @@ version = "0.1.24"

[[deps.GeometryOpsCore]]
deps = ["DataAPI", "GeoInterface", "StableTasks", "Tables"]
git-tree-sha1 = "5af490a896f5d9d37b47b252a803117089dfbaf3"
git-tree-sha1 = "69fc98947b06f8ac4279cf5bf8810373fe042be4"
uuid = "05efe853-fabf-41c8-927e-7063c8b9f013"
version = "0.1.6"
version = "0.1.7"

[[deps.Gettext_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"]
Expand Down Expand Up @@ -1346,9 +1352,9 @@ version = "0.2.0"

[[deps.Hwloc_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "f93a9ce66cd89c9ba7a4695a47fd93b4c6bc59fa"
git-tree-sha1 = "92f65c4d78ce8cdbb6b68daf88889950b0a99d11"
uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8"
version = "2.12.0+0"
version = "2.12.1+0"

[[deps.HypergeometricFunctions]]
deps = ["LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"]
Expand Down Expand Up @@ -1464,9 +1470,9 @@ weakdeps = ["Unitful"]

[[deps.IntervalArithmetic]]
deps = ["CRlibm", "MacroTools", "OpenBLASConsistentFPCSR_jll", "Random", "RoundingEmulator"]
git-tree-sha1 = "4e1b4155f04ffa0acf3a0d6e3d651892604666f5"
git-tree-sha1 = "694c52705f8b23dc5b39eeac629dc3059a168a40"
uuid = "d1acc4aa-44c8-5952-acd4-ba5d80a2a253"
version = "0.22.34"
version = "0.22.35"
weakdeps = ["DiffRules", "ForwardDiff", "IntervalSets", "LinearAlgebra", "RecipesBase", "SparseArrays"]

[deps.IntervalArithmetic.extensions]
Expand Down Expand Up @@ -1642,19 +1648,19 @@ version = "4.0.1+0"

[[deps.LLVM]]
deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Preferences", "Printf", "Unicode"]
git-tree-sha1 = "f0e861832695dbb70e710606a7d18b7f81acec92"
git-tree-sha1 = "5e8b243b2e4c86648dac82cf767ae1456000b92d"
uuid = "929cbde3-209d-540e-8aea-75f648917ca0"
version = "9.3.1"
version = "9.4.0"
weakdeps = ["BFloat16s"]

[deps.LLVM.extensions]
BFloat16sExt = "BFloat16s"

[[deps.LLVMExtra_jll]]
deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"]
git-tree-sha1 = "4b5ad6a4ffa91a00050a964492bc4f86bb48cea0"
git-tree-sha1 = "f8022e2c8b5eef5f30e7fb2fe52c97cc5674db23"
uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab"
version = "0.0.35+0"
version = "0.0.36+0"

[[deps.LLVMLoopInfo]]
git-tree-sha1 = "2e5c102cfc41f48ae4740c7eca7743cc7e7b75ea"
Expand Down Expand Up @@ -1985,9 +1991,9 @@ version = "1.11.0"

[[deps.MathOptInterface]]
deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON3", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test"]
git-tree-sha1 = "22b3e0bd1442bf9f5d3cb76e7d34ca87b88d0f36"
git-tree-sha1 = "d4eb6037ce33f974a58a2ea9ccba28beab2a93c1"
uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee"
version = "1.40.0"
version = "1.40.1"

[[deps.MathTeXEngine]]
deps = ["AbstractTrees", "Automa", "DataStructures", "FreeTypeAbstraction", "GeometryBasics", "LaTeXStrings", "REPL", "RelocatableFolders", "UnicodeFun"]
Expand Down Expand Up @@ -2066,9 +2072,9 @@ version = "1.6.4"

[[deps.NCDatasets]]
deps = ["CFTime", "CommonDataModel", "DataStructures", "Dates", "DiskArrays", "NetCDF_jll", "NetworkOptions", "Printf"]
git-tree-sha1 = "777b93739ca8804011ee1decad7b070f0e201bbc"
git-tree-sha1 = "be1095e2b767c19529409ec670bcfb01b825d717"
uuid = "85f8d34a-cbdd-5861-8df4-14fed0d494ab"
version = "0.14.7"
version = "0.14.8"

[[deps.NLSolversBase]]
deps = ["ADTypes", "DifferentiationInterface", "Distributed", "FiniteDiff", "ForwardDiff"]
Expand Down Expand Up @@ -2381,9 +2387,9 @@ version = "1.4.3"

[[deps.Polyester]]
deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"]
git-tree-sha1 = "6d38fea02d983051776a856b7df75b30cf9a3c1f"
git-tree-sha1 = "2082cc4be5e765bd982ed04ea06c068f4f702410"
uuid = "f517fe37-dbe3-4b94-8317-1923a5111588"
version = "0.7.16"
version = "0.7.17"

[[deps.PolyesterWeave]]
deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"]
Expand Down Expand Up @@ -2505,9 +2511,9 @@ version = "1.11.0"

[[deps.Random123]]
deps = ["Random", "RandomNumbers"]
git-tree-sha1 = "4743b43e5a9c4a2ede372de7061eed81795b12e7"
git-tree-sha1 = "dbe5fd0b334694e905cb9fda73cd8554333c46e2"
uuid = "74087812-796a-5b5d-8853-05524746bad3"
version = "1.7.0"
version = "1.7.1"

[[deps.RandomNumbers]]
deps = ["Random"]
Expand Down Expand Up @@ -2664,9 +2670,9 @@ version = "0.1.0"

[[deps.SciMLBase]]
deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Moshi", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"]
git-tree-sha1 = "bf77959adea9efa8929a7846e695d3da8842940e"
git-tree-sha1 = "846e89af4ec4ba471d3050a70405978cbdf70681"
uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
version = "2.89.1"
version = "2.91.1"

[deps.SciMLBase.extensions]
SciMLBaseChainRulesCoreExt = "ChainRulesCore"
Expand All @@ -2691,9 +2697,9 @@ version = "2.89.1"

[[deps.SciMLOperators]]
deps = ["Accessors", "ArrayInterface", "DocStringExtensions", "LinearAlgebra", "MacroTools"]
git-tree-sha1 = "d82853c515a8d9d42c1ab493a2687a37f1e26c91"
git-tree-sha1 = "6467d4e3eb86d9d7e31f43d01f9184409c0ea2be"
uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961"
version = "0.4.0"
version = "1.2.1"
weakdeps = ["SparseArrays", "StaticArraysCore"]

[deps.SciMLOperators.extensions]
Expand Down Expand Up @@ -3031,9 +3037,9 @@ version = "1.0.2"

[[deps.Thermodynamics]]
deps = ["DocStringExtensions", "KernelAbstractions", "Random", "RootSolvers"]
git-tree-sha1 = "efe74e0344fd7fb68b831316055290d80a62d9c1"
git-tree-sha1 = "f708faaf347760e9dcd82beb1a9455c86bdf9911"
uuid = "b60c26fb-14c3-4610-9d3e-2d17fe7ff00c"
version = "0.12.11"
version = "0.12.12"
weakdeps = ["ClimaParams"]

[deps.Thermodynamics.extensions]
Expand Down
2 changes: 1 addition & 1 deletion Project.toml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -41,7 +41,7 @@ ClimaComms = "0.6.2"
ClimaCore = "0.14.23"
ClimaDiagnostics = "0.2.10"
ClimaParams = "0.10.2"
ClimaTimeSteppers = "0.8"
ClimaTimeSteppers = "0.8.5"
ClimaUtilities = "0.1.24"
DataFrames = "1.4"
Dates = "1"
Expand Down
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