Pinned Loading

1. blobulator blobulator Public

   Blob-based analysis of protein sequences - available online at blobulator.branniganlab.org and as an open-source tool.

   Python 1 1

2. safep safep Public

   Tools for Analyzing and Debugging (SA)FEP calculations. See also the SAFEP Tutorial: https://github.com/jhenin/SAFEP_tutorial/tree/main Documentation: https://safep-alchemy.readthedocs.io/en/latest/

   Jupyter Notebook 6 1

3. nougat nougat Public

   Analysis of membrane height, thickness, and curvature

   Python 3

4. ELIC-phospholipid-identification ELIC-phospholipid-identification Public

   Data and Analyses related to "Open-channel structure of a pentameric ligand-gated ion channel reveals a mechanism of leaflet-specific phospholipid modulation". Nat Commun 13, 7017 (2022). https://d…

   Rich Text Format

5. density_threshold_affinity density_threshold_affinity Public

   Scripts to Assist Density Threshold Affinity Analysis - a method for obtaining free energies of protein-lipid binding. Originally described in: https://pubs.aip.org/aip/jcp/article/154/18/185102/20…

   Python 1