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Update services.json after replacing mtbseq by tbprofiler

Status: Open.

#594 In BU-ISCIII/buisciii-tools;

· victor5lm opened on Oct 10, 2025

Update README

Status: Open.

#593 In BU-ISCIII/buisciii-tools;

· victor5lm opened on Oct 10, 2025

Update tbprofiler assets/reports/md markdown file and tbprofiler assets/reports/results markdown file

Status: Open.

#592 In BU-ISCIII/buisciii-tools;

· victor5lm opened on Oct 10, 2025

Delete the mtbseq template and replace it by a new tbprofiler one, including its lablogs

Status: Open.

#591 In BU-ISCIII/buisciii-tools;

· victor5lm opened on Oct 10, 2025

Transform absolute pathways to relative pathways in lablog files from the templates

Status: Open.

#590 In BU-ISCIII/buisciii-tools;

· victor5lm opened on Oct 10, 2025

Update emmtyper lablog

Status: Open.

#589 In BU-ISCIII/buisciii-tools;

· victor5lm opened on Oct 10, 2025

Check if amrfinderplus can be launched with singularity

Status: Open.

#588 In BU-ISCIII/buisciii-tools;

· victor5lm opened on Oct 10, 2025

Add mcoiras in sftp_user.json

Status: Open.

#587 In BU-ISCIII/buisciii-tools;

· victor5lm opened on Oct 10, 2025

Replace the MTBSEQ template by TBProfiler

Status: Open.

#585 In BU-ISCIII/buisciii-tools;

· victor5lm opened on Sep 30, 2025

Review archive module for proper error handling

Status: Open.

#576 In BU-ISCIII/buisciii-tools;

· victor5lm opened on Aug 12, 2025

· 

v2.3.0

Review scratch module for proper error handling

Status: Open.

#575 In BU-ISCIII/buisciii-tools;

· victor5lm opened on Aug 12, 2025

· 

v2.3.0

Review copy-sftp module for proper error handling

Status: Open.

#574 In BU-ISCIII/buisciii-tools;

· victor5lm opened on Aug 12, 2025

· 

v2.3.0