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@B-UMMI

Bioinformatics @ Molecular Microbiology and Infection Unit

Script repository

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  1. chewBBACA chewBBACA Public

    BSR-Based Allele Calling Algorithm

    HTML 146 30

  2. long-read-catalog long-read-catalog Public

    catalog for long-read sequencing tools

    32 11

  3. INNUca INNUca Public

    INNUENDO quality control of reads, de novo assembly and contigs quality assessment, and possible contamination search

    Python 15 8

  4. LMAS LMAS Public

    LMAS - Last (Meta)Genomic Assembler Standing

    Python 11 2

  5. ReMatCh ReMatCh Public

    Reads mapping against target sequences, checking mapping and consensus sequences production

    C 8 5

  6. chewBBACA_tutorial chewBBACA_tutorial Public

    Step by step tutorial using chewBBACA with all necessary files and results

    HTML 7 1

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