Data Quality Service

Data Quality Service installation and extra steps

Installation

The Data Quality Service provided by ALA can be deployed as an additional and optional service. Some steps and tips to deploy and configure it:

• Be careful and install compatible versions and profiles depending on the backend you are using. The la-toolkit should give you some advices about how to install compatible versions. For instance, you'll need data-quality < 1.3.0 if you still use biocache-store`` and not a recent data-quality` service.
• Deployed it with ansible
• Enable the service, for instance, via the la-toolkit:

or editing your inventories (adding data_quality_enabled = true to your inventories).

• Download these sample profiles, edit and adapt them for you needs (you can translate our use your portal name instead of LA.)

  • profile_la.json
  • profile_la_legacy.json
  • profile_csdm.json
  • profile_csdm_legacy.json
  • profile_re_usable.json
  • profile_re_usable_legacy.json

• Import your adapted profiles in your deployed data quality service admin interface:

• Depending on the backend you are using, enable the legacy profiles or the pipelines profiles.