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1. viral_usher viral_usher Public

   Easily build an UShER tree of genomes for any virus in RefSeq/GenBank

   Python 4

2. viral_usher_trees viral_usher_trees Public

   UShER trees for common viral pathogens, built by viral_usher using GitHub Actions

   Python

3. ucscGenomeBrowser/kent ucscGenomeBrowser/kent Public

   UCSC Genome Browser source. "beta" is released version / "master" is testing.

   C 241 96

4. cov-lineages/pangolin cov-lineages/pangolin Public

   Software package for assigning SARS-CoV-2 genome sequences to global lineages.

   Python 440 105

5. yatisht/usher yatisht/usher Public

   Ultrafast Sample Placement on Existing Trees

   C++ 133 47

6. russcd/USHER_DEMO russcd/USHER_DEMO Public

   6 3