Variant Calling using iVar

About The Project

The purpose of this project was to develop a tool using iVar to perfrom variant analysis on BAM files.

Getting Started

Scripts are compatable with Python 3.9.14+, Pandas 2.0+, iVar 1.4.2+ .

Prerequisites

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Installation

conda create -n env_name python=3.9.14

conda install pandas

conda install ivar