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120 Open 895 Closed
120 Open 895 Closed
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Issues list

Distinguish solvers in simulation_status_to_str
#2754 opened May 21, 2025 by dweindl
Split benchmark collection tests ci
#2750 opened May 20, 2025 by dweindl
Segfault when computing forward sensitivities for model with no state variables bug
#2745 opened May 20, 2025 by dweindl
1
Avoid rate-limiting issues when retrieving remote PEtab problems ci
#2738 opened May 18, 2025 by dweindl
@dweindl
3
Consider using swig from PyPI
#2737 opened May 18, 2025 by dweindl
1
Consider using OpenBLAS PyPI wheels
#2736 opened May 18, 2025 by dweindl
Consider using mdspan c++ refactoring
#2734 opened May 16, 2025 by dweindl
Consider switching to C++ modules c++ refactoring
#2733 opened May 16, 2025 by dweindl
SBML import: Support non-persistent event triggers enhancement events related to handing discrete events SBML SBML import related
#2731 opened May 16, 2025 by dweindl
Drop MATLAB interface breaking change Issue changes API in backwards-incompatible way c++ documentation matlab
#2727 opened May 15, 2025 by dweindl
14 tasks
Incorrect initial root function values for piecewise-derived events bug SBML SBML import related
#2724 opened May 14, 2025 by dweindl
@dweindl
3
SBML import: support useValuesFromTriggerTime=true c++ enhancement events related to handing discrete events python SBML SBML import related
#2719 opened May 13, 2025 by dweindl
@dweindl
SBML import: support for event priorities c++ enhancement events related to handing discrete events python SBML SBML import related
#2718 opened May 13, 2025 by dweindl
@dweindl
TypeError: Argument 'Zero(ShapedArray(float0[1]))' of type '<class 'jax._src.ad_util.Zero'>' is not a valid JAX type
#2712 opened May 7, 2025 by dweindl
@FFroehlich
1
Incorrect handling of <= and >= in event triggers bug events related to handing discrete events SBML SBML import related
#2707 opened Apr 29, 2025 by dweindl
4
Support equality and xor in event trigger functions enhancement python SBML SBML import related
#2685 opened Apr 3, 2025 by dweindl
2 tasks done
@dweindl
Clarify steady state simulation & events
#2673 opened Mar 26, 2025 by dweindl
tests/test_jax.py fails with DeprecationWarnings
#2672 opened Mar 26, 2025 by dweindl
More informative sigma<=0 error messages c++ enhancement
#2670 opened Mar 24, 2025 by dweindl
Implement PEtab v2 import enhancement PEtab PEtab-import related
#2662 opened Mar 13, 2025 by dweindl
@dweindl
1
Make all SBML model quantities accessible in the imported model SBML SBML import related
#2661 opened Mar 13, 2025 by dweindl
Store symbolic model during model import python
#2659 opened Mar 13, 2025 by dweindl
More efficient PEtab parameter mapping performance PEtab PEtab-import related
#2639 opened Jan 30, 2025 by dweindl
Remove timepoint overide flattening in jax enhancement new Newly created
#2637 opened Jan 29, 2025 by FFroehlich
JAX preequilibration may silently fail
#2628 opened Dec 16, 2024 by FFroehlich
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