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4DNucleome

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PartSeg PartSeg Public

Tool for segmentation in bioimaging

Python 35 10

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Showing 10 of 11 repositories

PartSegCore-compiled-backend Public

4DNucleome/PartSegCore-compiled-backend’s past year of commit activity

Jupyter Notebook 1 BSD-3-Clause 0 2 4 Updated Nov 3, 2025
PartSeg Public
Tool for segmentation in bioimaging

4DNucleome/PartSeg’s past year of commit activity

Python 35 BSD-3-Clause 10 11 14 Updated Nov 3, 2025
PartSeg-smfish Public
PartSeg and napari plugin for smfish data

4DNucleome/PartSeg-smfish’s past year of commit activity

Python 1 BSD-3-Clause 0 1 0 Updated Jul 29, 2025
smfish-PartSeg Public

4DNucleome/smfish-PartSeg’s past year of commit activity

Python 0 0 0 0 Updated Oct 20, 2022
PartSeg_cellpose Public
Cellpose plugin for PartSeg

4DNucleome/PartSeg_cellpose’s past year of commit activity

Python 0 0 0 0 Updated Oct 4, 2021
big-fish Public Forked from fish-quant/big-fish
Toolbox for the analysis of smFISH images.

4DNucleome/big-fish’s past year of commit activity

Python 0 BSD-3-Clause 24 0 0 Updated Sep 6, 2021
tad_compare Public
Compare different sets of TADs inferred from Hi-C data (or other 3C technique) using different methods.

4DNucleome/tad_compare’s past year of commit activity

Python 1 2 1 1 Updated Jun 6, 2021
PartSegData Public
Data for PartSeg

4DNucleome/PartSegData’s past year of commit activity

Python 0 BSD-3-Clause 0 0 0 Updated Jan 26, 2021
md_soft Public
Polymer modelling engine

4DNucleome/md_soft’s past year of commit activity

Python 0 0 0 0 Updated Nov 3, 2020
PartSeg_stardist Public
stardist plugin for partseg

4DNucleome/PartSeg_stardist’s past year of commit activity

Python 0 0 0 0 Updated Jun 20, 2020

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