MHC-I genotyping on Split BAMs

[riasc]

BAMfiles probably need to be QNAME sorted (rather than coordinate sorted) when splitting them

[riasc]

WARNING 2024-06-20 22:56:20 SplitSamByNumberOfReads Splitting a coordinate sorted bam may result in invalid bams that do not always contain each read's mate in the same bam.