Skip to content

some question about output file #17

@HaoWangLYL

Description

@HaoWangLYL

hello,
i have some qusetion about the output files:

  1. Why the sum of all consensus.count in Summary.of.repetitive.regions_assembly.fa.csv not equal to the lines counts of all.repeats.from.assembly.fa.csv?
  2. in the all.repeats.from.assembly.fa.csv, what is the first col "x" means ? and there are many monromer length was 2 or others nrever show in the all.consensus.count in Summary.of.repetitive.regions_assembly.fa.csv?
  3. Are there the exactly coords of each SRs in the all.repeats.from.assembly.fa.csv ? And how can i kown the exactly coords of each SR?

I am so sorry for asking so many questions and would appreciate your reply.
thank you.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions