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Siemens scanner config doesn't seem to work #40

@HaoyuLu1022

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@HaoyuLu1022

Hi there,

after installing your simpet library, I tried the experiment.py with discovery_st scanner and it worked well. But as long as I change the scanner to siemens_,ct or siemens_mr, then it just throw out errors like this.

Segmentation fault (core dumped)
Process Process-1:
Traceback (most recent call last):
File "/miniconda3/envs/simpet/lib/python3.9/multiprocessing/process.py", line 315, in _bootstrap
self.run()
File "/miniconda3/envs/simpet/lib/python3.9/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/simpet/src/simset/simset_sim.py", line 190, in run_simset_simulation
tools.osrun(command, log_file)
File "/simpet/utils/tools.py", line 35, in osrun
raise TypeError(command)
TypeError: /simpet/include/SimSET/2.9.2/bin/phg /simpet/Results/test_image/SimSET_Sim_siemens_biograph_mct/division_0/phg.rec > /simpet/Results/test_image/SimSET_Sim_siemens_biograph_mct/division_0/simset_s0_init.log

which is weird. Seems like a problem with the SimSET submodule. Could you please look into that?

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