File tree Expand file tree Collapse file tree 3 files changed +21
-21
lines changed Expand file tree Collapse file tree 3 files changed +21
-21
lines changed Load Diff This file was deleted.
Original file line number Diff line number Diff line change
1
+ |PyPI | |Docs |
2
+
3
+ .. |PyPI | image :: https://img.shields.io/pypi/v/diffxpy.svg
4
+ :target: https://pypi.org/project/diffxpy
5
+ .. |Docs | image :: https://readthedocs.com/projects/diffxpy/badge/?version=latest
6
+ :target: https://diffxpy.readthedocs.io
7
+
8
+ # Fast and scalable differential expression analysis on single-cell RNA-seq data
9
+ diffxpy covers a wide range of differential expression analysis scenarios encountered in single-cell RNA-seq scenarios
10
+ and integrates into scanpy _ workflows.
11
+ Import diffxpy as `import diffxpy.api as de ` to access the following differential expression analysis-related tools:
12
+
13
+ 1. *differential expression analysis * in the module `de.test.* `
14
+ 2. *gene set enrichment analysis * based on differential expression calls in the module `de.enrich.* `
15
+
16
+ Refer to the documentation _ and the tutorials _ for details of these modules.
17
+
18
+ .. _scanpy : https://github.com/theislab/scanpy
19
+ .. _documentation : https://diffxpy.rtfd.io/en/latest
20
+ .. _tutorials : https://diffxpy.rtfd.io/en/latest/tutorials.html
Original file line number Diff line number Diff line change 5
5
author_email = 'david.fischer@helmholtz-muenchen.de, diffxpy@frhoelzlwimmer.de'
6
6
description = "Fast and scalable differential expression analysis on single-cell RNA-seq data"
7
7
8
- with open ("README.md " , "r" ) as fh :
8
+ with open ("README.rst " , "r" ) as fh :
9
9
long_description = fh .read ()
10
10
11
11
setup (
You can’t perform that action at this time.
0 commit comments