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[CLI] Refactor all CLI entrypoints to i.e. Clap #4045

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@cylewitruk

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@cylewitruk

While spending time in the code I've noticed that (I think) all CLI entrypoints are using manual parsing of command line arguments.
The code could be much cleaner and the CLI's more uniform if we refactored these to use a CLI arguments library (such as clap (155M downloads, one of the most popular libraries in the Rust ecosystem).

Not high prio, adding this as a placeholder so it exists and people can comment.

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