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lines changed Original file line number Diff line number Diff line change @@ -31,23 +31,18 @@ data_sc <- data[[1]]
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data_bulk <- data[[2]]
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data_true <- data[[3]]
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- parameter <- c(10,1e-5,1e-4)
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- nIter <- 20
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+ parameter <- c(1,1e-6,1e-4)
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result <- scrabble(data1,
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- parameter = parameter,
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- nIter = 30,
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- error_out_threshold = 1e-7,
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- nIter_inner = 100,
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- error_inner_threshold = 1e-5)
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+ parameter = parameter)
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```
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## MATLAB Version
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### Quick start
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#### Load the data
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There are three datasets in the .mat file. There are the true data set, Drop-out data set, and the imputed data set by SCRABBLE.
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```
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- load('demo_data_HF .mat')
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+ load('demo_data .mat')
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```
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#### Prepare the data
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We construct the data structure which is taken as one of the input of SCRABBLE.
@@ -59,12 +54,11 @@ data.data_bulk = data_bulk;
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#### Prepare the parameter for SCRABBLE
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Set up the parameters used in example
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```
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- parameter = [10,1e-5,1e-4];
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- nIter = 100;
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+ parameter = [1,1e-6,1e-4];
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```
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#### Run SCRABBLE
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```
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- dataRecovered = scrabble(data,parameter,nIter );
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+ dataRecovered = scrabble(data,parameter);
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```
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#### Visualize the results
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```
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