diff --git a/workflow/rules/circle_map.smk b/workflow/rules/circle_map.smk index 057c23b..e43a3c7 100644 --- a/workflow/rules/circle_map.smk +++ b/workflow/rules/circle_map.smk @@ -41,9 +41,9 @@ rule circle_map_realign: "logs/circle-map/{sample}.circles.log", conda: "../envs/circle_map.yaml" - threads: 4 + threads: 16 resources: - mem_mb=lambda wc, input: input.size_mb * 2.5, + mem_mb=lambda wc, threads: threads * 5000, shell: "Circle-Map Realign " " -i {input.candidates_bam} "