Merge pull request #253 from singularityhub/update/containers-2024-08-29

[bot] update/containers-2024-08-29

Author: vsoch

quay.io/biocontainers/blast2galaxy/container.yaml

@@ -0,0 +1,19 @@
+url: https://biocontainers.pro/tools/blast2galaxy
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for blast2galaxy
+latest:
+  0.1.0a1--pyhdfd78af_0: sha256:35886b2a9f40073cb723be70395bca03a396cfa9e59cc025af9f8d970a55e207
+tags:
+  0.1.0a1--pyhdfd78af_0: sha256:35886b2a9f40073cb723be70395bca03a396cfa9e59cc025af9f8d970a55e207
+docker: quay.io/biocontainers/blast2galaxy
+aliases:
+  bioblend-galaxy-tests: /usr/local/bin/bioblend-galaxy-tests
+  blast2galaxy: /usr/local/bin/blast2galaxy
+  markdown-it: /usr/local/bin/markdown-it
+  2to3-3.12: /usr/local/bin/2to3-3.12
+  idle3.12: /usr/local/bin/idle3.12
+  pydoc3.12: /usr/local/bin/pydoc3.12
+  python3.12: /usr/local/bin/python3.12
+  python3.12-config: /usr/local/bin/python3.12-config
+  pygmentize: /usr/local/bin/pygmentize
+  normalizer: /usr/local/bin/normalizer

quay.io/biocontainers/jclusterfunk/container.yaml

@@ -0,0 +1,35 @@
+url: https://biocontainers.pro/tools/jclusterfunk
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for jclusterfunk
+latest:
+  0.0.25--hdfd78af_0: sha256:be12097c610ff9665e949117752a1f05dc08f0dccccac7b1b13f9c7e1c44660c
+tags:
+  0.0.25--hdfd78af_0: sha256:be12097c610ff9665e949117752a1f05dc08f0dccccac7b1b13f9c7e1c44660c
+docker: quay.io/biocontainers/jclusterfunk
+aliases:
+  jclusterfunk: /usr/local/bin/jclusterfunk
+  jwebserver: /usr/local/bin/jwebserver
+  jpackage: /usr/local/bin/jpackage
+  cups-config: /usr/local/bin/cups-config
+  ippeveprinter: /usr/local/bin/ippeveprinter
+  ipptool: /usr/local/bin/ipptool
+  hb-info: /usr/local/bin/hb-info
+  jfr: /usr/local/bin/jfr
+  tjbench: /usr/local/bin/tjbench
+  jdeprscan: /usr/local/bin/jdeprscan
+  jhsdb: /usr/local/bin/jhsdb
+  jimage: /usr/local/bin/jimage
+  jlink: /usr/local/bin/jlink
+  jmod: /usr/local/bin/jmod
+  jshell: /usr/local/bin/jshell
+  aserver: /usr/local/bin/aserver
+  jdeps: /usr/local/bin/jdeps
+  jar: /usr/local/bin/jar
+  jarsigner: /usr/local/bin/jarsigner
+  java: /usr/local/bin/java
+  javac: /usr/local/bin/javac
+  javadoc: /usr/local/bin/javadoc
+  javap: /usr/local/bin/javap
+  jcmd: /usr/local/bin/jcmd
+  jconsole: /usr/local/bin/jconsole
+  jdb: /usr/local/bin/jdb

quay.io/biocontainers/spapros/container.yaml

@@ -0,0 +1,43 @@
+url: https://biocontainers.pro/tools/spapros
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for spapros
+latest:
+  0.1.5: sha256:b79ed5b311e7cb1c94d253e1426b9a81e885e8638ca8369b8831a14ed4d24cf6
+tags:
+  0.1.5: sha256:b79ed5b311e7cb1c94d253e1426b9a81e885e8638ca8369b8831a14ed4d24cf6
+docker: quay.io/biocontainers/spapros
+aliases:
+  bandit: /usr/local/bin/bandit
+  bandit-baseline: /usr/local/bin/bandit-baseline
+  bandit-config-generator: /usr/local/bin/bandit-config-generator
+  debugpy: /usr/local/bin/debugpy
+  nox: /usr/local/bin/nox
+  spapros: /usr/local/bin/spapros
+  tox: /usr/local/bin/tox
+  tox-to-nox: /usr/local/bin/tox-to-nox
+  virtualenv: /usr/local/bin/virtualenv
+  rst2html: /usr/local/bin/rst2html
+  rst2html4: /usr/local/bin/rst2html4
+  rst2html5: /usr/local/bin/rst2html5
+  rst2latex: /usr/local/bin/rst2latex
+  rst2man: /usr/local/bin/rst2man
+  rst2odt: /usr/local/bin/rst2odt
+  rst2pseudoxml: /usr/local/bin/rst2pseudoxml
+  rst2s5: /usr/local/bin/rst2s5
+  rst2xetex: /usr/local/bin/rst2xetex
+  rst2xml: /usr/local/bin/rst2xml
+  pandoc-lua: /usr/local/bin/pandoc-lua
+  pbr: /usr/local/bin/pbr
+  jupyter-dejavu: /usr/local/bin/jupyter-dejavu
+  jupyter-execute: /usr/local/bin/jupyter-execute
+  qconvex: /usr/local/bin/qconvex
+  qdelaunay: /usr/local/bin/qdelaunay
+  qhalf: /usr/local/bin/qhalf
+  qhull: /usr/local/bin/qhull
+  qvoronoi: /usr/local/bin/qvoronoi
+  rbox: /usr/local/bin/rbox
+  sphinx-apidoc: /usr/local/bin/sphinx-apidoc
+  sphinx-autogen: /usr/local/bin/sphinx-autogen
+  sphinx-build: /usr/local/bin/sphinx-build
+  sphinx-quickstart: /usr/local/bin/sphinx-quickstart
+  h5tools_test_utils: /usr/local/bin/h5tools_test_utils

quay.io/biocontainers/squirrel/container.yaml

@@ -0,0 +1,40 @@
+url: https://biocontainers.pro/tools/squirrel
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for squirrel
+latest:
+  1.0.8--pyhdfd78af_0: sha256:809834cfc36c79f8009e202f353989be0e78fa315ed9ede8662d1930e02825a2
+tags:
+  1.0.8--pyhdfd78af_0: sha256:809834cfc36c79f8009e202f353989be0e78fa315ed9ede8662d1930e02825a2
+docker: quay.io/biocontainers/squirrel
+aliases:
+  gofasta: /usr/local/bin/gofasta
+  jclusterfunk: /usr/local/bin/jclusterfunk
+  msa.smk: /usr/local/bin/msa.smk
+  phylo.smk: /usr/local/bin/phylo.smk
+  reconstruction.smk: /usr/local/bin/reconstruction.smk
+  squirrel: /usr/local/bin/squirrel
+  rst2html: /usr/local/bin/rst2html
+  rst2html4: /usr/local/bin/rst2html4
+  rst2html5: /usr/local/bin/rst2html5
+  rst2latex: /usr/local/bin/rst2latex
+  rst2man: /usr/local/bin/rst2man
+  rst2odt: /usr/local/bin/rst2odt
+  rst2pseudoxml: /usr/local/bin/rst2pseudoxml
+  rst2s5: /usr/local/bin/rst2s5
+  rst2xetex: /usr/local/bin/rst2xetex
+  rst2xml: /usr/local/bin/rst2xml
+  iqtree2: /usr/local/bin/iqtree2
+  qconvex: /usr/local/bin/qconvex
+  qdelaunay: /usr/local/bin/qdelaunay
+  qhalf: /usr/local/bin/qhalf
+  qhull: /usr/local/bin/qhull
+  qvoronoi: /usr/local/bin/qvoronoi
+  rbox: /usr/local/bin/rbox
+  mako-render: /usr/local/bin/mako-render
+  iqtree: /usr/local/bin/iqtree
+  numpy-config: /usr/local/bin/numpy-config
+  jwebserver: /usr/local/bin/jwebserver
+  yte: /usr/local/bin/yte
+  plac_runner.py: /usr/local/bin/plac_runner.py
+  docutils: /usr/local/bin/docutils
+  pulptest: /usr/local/bin/pulptest