Skip to content

Check list

Jump to bottom
Thomas Cokelaer edited this page Jul 28, 2020 · 7 revisions

Before launching the pipeline

  1. check the content of the script fastqc.sh, especially on a SLURM cluster to check the slurm options.

After the pipeline has finished:

  1. check that the file summary.html exists. If not, it means something went wrong in creating the HTML file. If so, check whether the file multiqc/multiqc_report.html exists

This pipeline is part of the Sequana project. If you use sequana_demultiplex, please consider citing us. Visit the How to cite ? section. You may also visit the pipeline page and star us.

Home

Clone this wiki locally